Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq10768 237 1e-56 seq8589 147 2e-29 seq10532 118 8e-21 seq10661 98.7 8e-15 seq10237 96.9 3e-14 >seq10768 Length=1303713 Score = 237 bits (262), Expect = 1e-56 Identities = 951/1475 (64%), Gaps = 37/1475 (3%) Strand=Plus/Minus Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 ||||| |||||| || || || |||||||| | ||||||||| || ||||| || || || Sbjct 224634 GGCAGACACATTCAGTATGCCGTTGGCATCAATATCAAATGTCACCTCAATCTGTGGCAC 224575 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 ||||| | || ||||||||||| ||| | ||| | || || || || | || Sbjct 224574 TCCTCTTGGGGCTGGTGGGATCCCAGACAAGTCGAATTTCCCTAGCAGGTTGTTGTGCTT 224515 Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437 || | | || ||| || || || | | ||| || ||| ||| || || || ||||| Sbjct 224514 GGTAAGTGGTCTTTCCCCTTCAAACACTCTGATGGTCACTGCAGGCTGGTTGTCGGAATA 224455 Query 517438 AGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 517496 ||||| || |||| | ||| || || | ||||| ||||||| || | Sbjct 224454 CGTTGTGAAGG-TCTGTGTGGCTTTGGTTGGGATGCGAGCATTTCTTTCAATAAGTTTTG 224396 Query 517497 TCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 517556 |||| | | |||||||| || | ||||| || || |||| ||||| || || | | Sbjct 224395 TCATCACCTCTCCTGCTGTCTCAATGCCAAGTGAGAGTGGAGCCACATCTACCAGAAGCA 224336 Query 517557 TATT-TTGAAGTTTTTCATCAGT-TTGAC--CAACAAGAATAGCTGCTTGAATAGCAGCA 517612 || |||| ||| ||| | ||| | | || || ||||| |||| || ||| Sbjct 224335 CATCCTTGAC----TTCGTCACTCTTGTCTCCTGACAGGATGGCTGCCTGAACTGCTGCA 224280 Query 517613 CCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAA 517672 ||||| || ||||| |||||||| || | | | || ||| || ||| | || | Sbjct 224279 CCATAAGCCACAGCCTCATCAGGGTTGATGGACTTGTTCAGTGACTTGCCACTAAAGTAT 224220 Query 517673 TTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 | ||| | | ||| | |||||| | ||||| ||||| ||||| | || | || Sbjct 224219 TCCTCAAGCATCT-TCTGGATCTTAGGTACACGAGTAGATCCACCAACCAGGACCACCTC 224161 Query 517732 ATGCACCTGTGATTTATCCAGT--TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGA 517789 ||| | ||| | | | | | || | ||| | | |||| | || || || | Sbjct 224160 ATGGA--TGTCACTCTTACTGAACTTAGCATCACTCAGAGCTTTGTTGACAGGATCCAAG 224103 Query 517790 CCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-T 517848 | | ||| | ||| ||||| | || || || | |||| | || | | | | Sbjct 224102 CAGGACAAAAATAGGTCAGAACACAAGTCCTCAAACCTTGCTCGGCT--GATTTTCGTGT 224045 Query 517849 ATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATA 517907 | || |||||||| || || | ||| || ||||| || | | || ||| || || | Sbjct 224044 AGAAATCAATTCCCTCAAAAAGAGAGTCCACTTCGATACTTGCTTCAGTGCTGGATGACA 223985 Query 517908 GTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-TGATTGA 517966 | | | || || || ||||| || || || | ||||| | ||| | | ||| Sbjct 223984 GGGTCCTCTTGGCTCGCTCACAGGCAGTTCTCAATCTTCTCATGGCACGGGAGTTCTTGC 223925 Query 517967 TTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGAT 518024 | || ||| | || |||||||||||||| ||| ||||| | ||| |||| || || | Sbjct 223924 T-CATGTCTTTCTTGTATTTTCTCTTGAATTCTGCAACAAA--ATGGTTTACCAGCCGGT 223868 Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT- 518083 | ||||| ||||| || || | | ||| | ||||| || | | | || | || ||| Sbjct 223867 TGTCAAAGTCTTCTCCACCAAGATGAGTGTCTCCTGCAGTTGATTTCACCTCAAACAGTG 223808 Query 518084 --CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAA 518141 ||||| |||| || | || | |||||| || || || |||| |||||| |||| Sbjct 223807 AGCCATCGTCAATAGTGAGAATGGACACATCAAAAGTGCCGCCTCCCAGATCAAATATAA 223748 Query 518142 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 | |||||| |||| || | ||||| | ||||| || | ||| || ||||| | Sbjct 223747 GCACATTCTTTTCCCCAGACAGGCTCTTATCCAAGCCATAAGCCAGAGCTGCGGCAGTCG 223688 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 | |||||||| | |||||| || || || || ||||| | ||||||||||| || |||| Sbjct 223687 GCTCATTAATTACTCTCAACACGTTCAGTCCGGCAATGGTCCCTGCATCTTTCGTTGCTT 223628 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTAC 518321 | || || || |||||||| |||||||| || ||||| || || || |||| || | Sbjct 223627 GCCTCTGGGAGTCGTTAAAGTATGCAGGGACTGTAATCACTGCGCTGGTGACTTTTTGTC 223568 Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381 | | || || || |||| ||||| || | | | ||| || |||| ||| | Sbjct 223567 CGAGGTAGGCTTCGGCTGTTTCCTTCATCTTGCCCAGTACCATGGAGCTGATTTCTTCGG 223508 Query 518382 GGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACAT 518441 | | | |||| || | || |||| | | ||||| || || Sbjct 223507 CAGCAAAAGTCTTGCGCTCGCCCTTGTACTCCACTTGGATCTTCGGTTTGTTGTTGTCAC 223448 Query 518442 TAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACT---TTGGTCATTAAAAT 518498 | |||| || |||||||| |||||| || || || ||| | | ||||| || Sbjct 223447 TGATAATCTTGAATGGCCACAGTTTCATGTCAGACTGCACAGTAGCATCGTCAT----AT 223392 Query 518499 C-TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGA 518557 | | || || | | || || || || || || || |||||| | || |||| Sbjct 223391 CGGCGGCCTATCAGCCTCTTGGCGTCGAAGATTGTGTTCTCTGGATTCAAAGCCACTTGG 223332 Query 518558 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTT 518617 | ||| |||||||| || | | | || || || || || ||| || |||||| Sbjct 223331 TTTTTCGCTGCATCGCCGACTAATCGCTCGGTGTCGGTGAAGCCAACGTAACTCGGAGTT 223272 Query 518618 GTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACA 518677 || | ||||||||||| || || ||||| || ||||| || ||||| | || ||||| Sbjct 223271 GTTCTGTTACCTTGATCGTTGGCGATAATCTCCACTTTGCCGTTTTGGAAAACCCCTACG 223212 Query 518678 CAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 ||| | || ||||| || || || |||||||| Sbjct 223211 CAAGAGTAGGTAGTTCCCAAGTCGATTCCAATAGC 223177 >seq8589 Length=14632 Score = 147 bits (162), Expect = 2e-29 Identities = 350/515 (68%), Gaps = 23/515 (4%) Strand=Plus/Plus Query 397198 TTCATCACGAGCAATAAATTGATTTGATATAATTAGACCAGGCATTACATGCATTTCTCT 397257 ||||||||||| ||| || | || || | ||| |||||||||| | |||| Sbjct 5818 TTCATCACGAGAAATTAACTCGTTAGAAAATGTTAAACCAGGCATT------AACCCTCT 5871 Query 397258 AGTTTTTAACCAGAAAATCGAAGCAAATGATCCACTAAAGAAAACGCCTTCTACAATAGA 397317 | |||||||| ||||| ||| ||| | ||| ||||| | ||||| ||| | Sbjct 5872 TTTCTTTAACCAAAAAATAGAACAAAACGCTCCTGAGAAGAATATTCCTTCCACAGCTGC 5931 Query 397318 GAATGCTACTAATTTGTGAGCATAAGTCTTATCAGATTTAATCCA-TTTATTACACCAAT 397376 ||||| | | | | | |||| ||| |||||| | |||||| |||| | | ||| | Sbjct 5932 AAATGCGATAAGTCTTTCAGCAAAAG---AATCAGACTCAATCCATTTTAATGC-CCATT 5987 Query 397377 CAGC-TTTCTTTTTAATACTTGGCATAGTTTTAATAGAAT-TAATGAGTT-TATTTCTCA 397433 | || |||||||||| | | ||| | || ||||| || ||| | || | |||||| Sbjct 5988 CTGCTTTTCTTTTTATTGC-TGGAAACACTTCAATAGCATGGAATAATTTATCTTTCTCT 6046 Query 397434 AAGCATCATCTTTAACAAATGTAGTCAA-CATTAGTGAATACATTTCTCCATGAGCATTT 397492 | | |||||||| ||| | ||| |||| || || ||||| |||| | |||| ||| Sbjct 6047 A--CCTCATCTTTCACATAAGTA-TCAATCAAAAGAGAATAGGTTTCGCTATGAATATTC 6103 Query 397493 TCCATTGCATA--TTGGAAACCATAAGCACATTCAGCTTCTTTTATTTTCACAACATCAA 397550 ||||| |||| ||| || ||||| | ||| |||||| || ||| ||| || Sbjct 6104 TCCAT--CATAATTTGAAATCCATAGAAAAATTTAGCTTCGGCATATTGCACTTCATTAA 6161 Query 397551 TAAGATTTTCTTTAATATTAGCATTAACAATACCATCAGCTGCCGCAAAAAATGCCAATA 397610 || ||||||| | ||| |||| ||||| || |||| ||| |||||||| || || | Sbjct 6162 CAAAATTTTCTGCTAAATTTTCATTCACAATCCCGTCAGATGCAGCAAAAAAAGCTAAAA 6221 Query 397611 CGTGCATAATAAAATTTCTATCATCATCGCTCAAATGATTATTCCAATCATTCACATCTT 397670 ||| ||||||||| | | ||||| || | || | | ||||| || | | ||||| Sbjct 6222 TATGCTTAATAAAATATTTTTCATCTTCATTTAATTTCGTGTTCCAGTCTGTGATATCTT 6281 Query 397671 TTGCCAAATCCACTTCTTCAACTGTCCAATAATTT 397705 |||||| | ||||||| | |||||| || || Sbjct 6282 GATGCAAATCTATTTCTTCAGCAGTCCAAAAACTT 6316 >seq10532 Length=317665 Score = 118 bits (130), Expect = 8e-21 Identities = 161/224 (72%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 |||||| ||| |||||||| | |||||| | ||| | ||| | ||| || | | Sbjct 234686 ACATCAAAGGTACCACCACCGAGATCAAAGACAAGGATGTTCTTCTCTCCCTCCT---TC 234630 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | ||||| || | |||||||||||| |||||||| || || | || ||| || Sbjct 234629 TTGTCCATGCCATAGGCGATAGCAGCAGCAGTAGGTTCATTGATGATACGCATGACAGTA 234570 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 ||||| ||||| ||||| || || |||||||| | |||| ||| || || || || Sbjct 234569 AGACCGGCAATGGCACCTGCGTCCTTGGTGGCTTGACGCTGTGCATCATTGAAGTAGGCG 234510 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGC 518331 || ||||| | |||||||| || |||| || |||| ||| || Sbjct 234509 GGGACAGTGACAACGGCATGGGTGACTTTCTTGCCAAGATATGC 234466 >seq10661 Length=563269 Score = 98.7 bits (108), Expect = 8e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 518540 GGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAAT 518599 || || ||||| | |||| ||| || ||||| || || || | ||||| || | || Sbjct 49810 GGGTTCATTGCGACCTGATTTTTAGCGGCATCGCCGATGAGTCGCTCTGTGTCAGAGAAA 49869 Query 518600 GAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCA 518659 | ||||| |||||| |||||||| |||||||| |||||||||||||| || || || Sbjct 49870 GCTACATAGCTTGGAGTAGTGCGATTTCCTTGATCGTTCGCAATAATTTCGACCTTTCCG 49929 Query 518660 TTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 518708 | ||| | ||||||||||| | | || || || | ||| || |||| Sbjct 49930 TGTTGGAAAACACCTACACAGGAATAGGTAGTACCAAGATCGATTCCAA 49978 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 518243 CCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACG 518302 ||||||||||| || || || | ||||||||||| || || || ||||| || | ||| Sbjct 49168 CCTGCATCTTTGGTAGCCTGACGCTGTGAATCGTTGAAGTAGGCCGGAACTGTGACTACG 49227 Query 518303 GCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATC 518362 ||||| ||||||| | || | |||||| |||||||| |||||||| | |||| | Sbjct 49228 GCATCGGTTACTTTTGCCCCTAGATAAGCTTCTGCCGTTTCCTTCATTTTGGTCAAAACC 49287 Query 518363 ATTGATGAAATTTG 518376 || || ||||| || Sbjct 49288 ATGGACGAAATCTG 49301 >seq10237 Length=94279 Score = 96.9 bits (106), Expect = 3e-14 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 518525 AAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 518584 ||||||||||| || ||||| ||||| |||| | ||| || ||||| |||| || | Sbjct 41277 AAAATAGTATTAGTAGGATTCATTGCGACTTGGTTTTTCGCGGCATCGCCAACCAAGCGC 41336 Query 518585 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 518644 ||| || || || | |||||| ||| || || ||||| ||||| || || || || Sbjct 41337 TCTTCATCCGTGAAGGCAACATAGCTTGGCGTGGTACGATTTCCTTGGTCGTTTGCGATG 41396 Query 518645 ATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATA 518704 ||||| || || || | || | || || |||||| | ||||| || | ||| ||| Sbjct 41397 ATTTCGACCTTGCCGTGCTGAAAAACTCCAACACAAGAGTAGGTTGTGCCAAGATCTATA 41456 Query 518705 CCAATAGC 518712 |||||||| Sbjct 41457 CCAATAGC 41464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780286269931624