Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq10803 95.1 2e-14 >seq10803 Length=2816097 Score = 95.1 bits (104), Expect = 2e-14 Identities = 125/172 (73%), Gaps = 6/172 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| | ||||| || | || ||||| || ||||| |||||| ||| | Sbjct 2064458 CCACAGCACATGCTAATGCGAGTGAGTGTGGGAATCCACGGTGAAGACATTGATGCTGCT 2064399 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGT---TCATCCACGCAACACCAACCCTC 111728 | ||||| ||| || |||||| || | || ||| ||| ||| |||||||||| Sbjct 2064398 ATTGAGACTTACAACCTGATGTC---TGAAAAGTGGTTCACCCATGCATCACCAACCCTG 2064342 Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAA 111780 || ||||| || ||| |||| |||||||||||||| || ||| || ||| Sbjct 2064341 TTTAACGCAGGCACAAACCGACCACAAATGTCCAGTTGCTTTCTTCTTACAA 2064290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620658568738880