Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq10803 93.3 5e-14 >seq10803 Length=2816097 Score = 93.3 bits (102), Expect = 5e-14 Identities = 170/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 107063 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 107122 ||||| || ||||| || || || | ||||| | | |||||||||||||| || Sbjct 2064211 CCAATTCCTCCAGCATTTTTAGAAATAAGTGCACAAGTCCTTAGAGTTCCATAGATTCCT 2064270 Query 107123 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 107182 | || || || | | | ||| |||||||||||||| || |||| ||| Sbjct 2064271 TCAATACTATCATCAGACATTGTAAGAAGAAAGCAACTGGACATTTGTGGTCGGTTTGTG 2064330 Query 107183 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTAT 107242 || || || || |||||||||| ||| || ||||| || |||||| || ||| Sbjct 2064331 CCTGCGTTAAACAGGGTTGGTGATGCATGGGTGAACCACTTTTCAGACATCAGGTTGTAA 2064390 Query 107243 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATG 107302 ||||| | ||| |||||||||||| |||||||| || | ||| ||||| | |||| Sbjct 2064391 GTCTCAATAGCAGCATCAATGTCTTCACCGTGGATTCCCACACTCACTCGCATTAGCATG 2064450 Query 107303 TATTGGGGT 107311 | || ||| Sbjct 2064451 TGCTGTGGT 2064459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589901123092960