Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq9826 109 2e-19 >seq9826 Length=41569 Score = 109 bits (120), Expect = 2e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 37597 CTGGCGAAAGAGTTACGCTGCCCGGTTATAGCATTGTCTCAGTTGAACCGTAATTTGGAG 37656 ||||| ||||| || ||||||||| || || |||| ||| | |||||| ||||| Sbjct 219 CTGGCCAAAGAATTCAACTGCCCGGTGATTGCCCTGTCGCAGCTTAACCGTGGCCTGGAG 278 Query 37657 CAGCGTGCAAACAAGCGACCGTGCAATGCCGACTTACGTGAGTCGGGCGTAATCGAGCAG 37716 ||||| | ||||| || ||| ||| ||||||| || || || || | |||||||||| Sbjct 279 CAGCGCCCTAACAAACGCCCGATCAACTCCGACTTGCGCGAATCCGGGGCAATCGAGCAG 338 Query 37717 GAAGCTGATGTGATTTTCATGGTTTATCGCGACGAGAAGTACAACCCGCAGACAGAGATG 37776 || || || | || | | ||||| ||||||||| ||| |||| |||| ||| Sbjct 339 GACGCCGACATCATCATGTTCGTTTACCGCGACGAGGTGTATCACCCCGAGACCGAGTAC 398 Query 37777 AAAGGCGTCACTGAAATCAT 37796 || ||||| | |||||||| Sbjct 399 AAGGGCGTGGCCGAAATCAT 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151151805112968