Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq10485 163 6e-35 seq10777 140 7e-28 seq10493 127 5e-24 seq10798 113 1e-19 >seq10485 Length=261005 Score = 163 bits (180), Expect = 6e-35 Identities = 170/223 (76%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | ||| | ||||||||| |||||||| || || ||||| ||| ||| || Sbjct 97883 TCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTAAGGGT 97824 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || |||||||| ||||| || || |||||||| ||||||||||||||||| |||||||| Sbjct 97823 TCGGCCATCTTCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGGGAATGCC 97764 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| || || ||||| || ||||| ||| ||||| || Sbjct 97763 TTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAG 97704 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | || || || |||| || || || || | ||||||| Sbjct 97703 AGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCATT 97661 Score = 150 bits (166), Expect = 4e-31 Identities = 167/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | ||| | ||||||||| |||||||| || || ||||| ||| ||| || Sbjct 98111 TCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTAAGGGT 98052 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || ||||||||||| || || || |||||||| | || ||||||||||| |||||||| Sbjct 98051 TCGGCCATCTTCGAGTTGTTTTCCGGCGAAGATGAAACGCTGTTGGTCTGGGGGAATGCC 97992 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| || || ||||| || ||||| ||| ||||| || Sbjct 97991 TTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAG 97932 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | || || || |||| || || || || | ||||||| Sbjct 97931 AGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCATT 97889 Score = 145 bits (160), Expect = 2e-29 Identities = 166/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | ||| |||||||| || |||||||| || || ||||| ||| || || Sbjct 97655 TCTGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTCAGGGT 97596 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || ||||||||||| || ||||| ||||| || | || ||||||||||| |||||||| Sbjct 97595 TCGGCCATCTTCGAGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCC 97536 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| || || || || || || || | || ||||| || Sbjct 97535 TTCCTTGTCTTGAATTTTAGCTTTCACATTTTCGATCGTATCGCTAGGCTCAACTTCTAG 97476 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| | ||||| || || | ||||| || || | ||||||| Sbjct 97475 GGTGATAGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCATT 97433 >seq10777 Length=1546546 Score = 140 bits (154), Expect = 7e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| |||||||| || |||||||| || || ||||| ||| || |||| |||||||| Sbjct 767675 AACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTTAGGGTTCGGCCATCTTC 767616 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||| || || ||||| || | || ||||||||||| ||||||||||| |||||||| Sbjct 767615 AAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTG 767556 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| || || ||||| || ||||| | || ||||| ||||| | || || Sbjct 767555 AATTTTCGCTTTTACATTCTCGATCGTGTCACTAGGCTCGACTTCTAGGGTGATAGTTTT 767496 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | |||||| Sbjct 767495 ACCAGTGAGTGTTTTCACAAAGATTTGCAT 767466 >seq10493 Length=264610 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || ||||| |||||||| || || || ||||| || || || | || ||||| Sbjct 49492 AACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTGCGTCCGTCTTC 49433 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||| ||||| || ||||||||||||| ||||||||| || ||||||||||||||||| || Sbjct 49432 GAGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGCGGAATGCCTTCTTTGTCCTG 49373 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| ||| || || || || || || ||| || || | || | || || Sbjct 49372 AATTTTCGCCTTCACATTTTCGATCGTATCGCTCGGTTCGACCTCTAAAGTGATGGTTTT 49313 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||| ||| || || || | ||||| Sbjct 49312 TCCGGTCAGAGTCTTCACAAAGATCTGCAT 49283 Score = 122 bits (134), Expect = 2e-22 Identities = 156/214 (73%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || ||||| |||||||| || || || ||||| ||| || || | || ||||| Sbjct 50404 AACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCTTC 50345 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| | | ||| |||||||| || || || ||||||||||| Sbjct 50344 AAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTG 50285 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107 || || || || |||||||| ||||| ||| ||| ||||| | || | || Sbjct 50284 GATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATGGT 50228 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||||| || | |||||| ||||| | |||||| Sbjct 50227 CTTTCCAGTGAGAGTTTTGACGAAAATCTGCATT 50194 Score = 116 bits (128), Expect = 8e-21 Identities = 155/214 (72%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || ||||| |||||||| || || || ||||| ||| || || | || ||||| Sbjct 49948 AACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCTTC 49889 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| | | ||| |||||||| || || || ||||||||||| Sbjct 49888 AAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTG 49829 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107 || || || || |||||||| ||||| ||| ||| ||||| | || | || Sbjct 49828 GATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATGGT 49772 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||||| || | ||| || ||||| | |||||| Sbjct 49771 CTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49738 Score = 116 bits (128), Expect = 8e-21 Identities = 155/214 (72%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || ||||| |||||||| || || || ||||| ||| || || | || ||||| Sbjct 50176 AACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCTTC 50117 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| | | ||| |||||||| || || || ||||||||||| Sbjct 50116 AAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTG 50057 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107 || || || || |||||||| ||||| ||| ||| ||||| | || | || Sbjct 50056 GATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATGGT 50000 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||||| || | ||| || ||||| | |||||| Sbjct 49999 CTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49966 Score = 116 bits (128), Expect = 8e-21 Identities = 155/214 (72%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || ||||| |||||||| || || || ||||| ||| || || | || ||||| Sbjct 50632 AACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCTTC 50573 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| | | ||| |||||||| || || || ||||||||||| Sbjct 50572 AAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTG 50513 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107 || || || || |||||||| ||||| ||| ||| ||||| | || | || Sbjct 50512 GATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATGGT 50456 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||||| || | ||| || ||||| | |||||| Sbjct 50455 CTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 50422 Score = 116 bits (128), Expect = 8e-21 Identities = 155/214 (72%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || ||||| |||||||| || || || ||||| ||| || || | || ||||| Sbjct 50860 AACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCTTC 50801 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || || ||||| | | ||||||||||| || || || ||||||||||| Sbjct 50800 AAGTTGCTTGCCGGCAAAGATCAACCTCTGTTGGTCTGGTGGGATACCCTCTTTGTCTTG 50741 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107 || || || || |||||||| ||||| ||| ||| ||||| | || | || Sbjct 50740 GATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATGGT 50684 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||||| || | |||||| ||||| | |||||| Sbjct 50683 CTTTCCAGTGAGAGTTTTGACGAAAATCTGCATT 50650 Score = 113 bits (124), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || ||||| |||||||| || || || ||||| || || || | || ||||| Sbjct 49720 AACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTGCGTCCGTCTTC 49661 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| | | ||| |||||||| || || || ||||||||||| Sbjct 49660 AAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTG 49601 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107 || || || || |||||||| ||||| ||| ||| ||||| | || | || Sbjct 49600 GATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATGGT 49544 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||||| || | ||| || ||||| | |||||| Sbjct 49543 CTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49510 >seq10798 Length=2343873 Score = 113 bits (124), Expect = 1e-19 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || |||| || | ||| || || ||||||||||| || ||||| ||| ||| || | Sbjct 1324516 AGCCTCAGCACCAAGTGTAGGGTTGACTCTTTTTGGATGTTGTAGTCGCTAAGGGTACGA 1324457 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 |||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||| Sbjct 1324456 CCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCTGGAGGAATGCCT 1324400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109328018622668