Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq9558 168 2e-37 >seq9558 Length=35122 Score = 168 bits (186), Expect = 2e-37 Identities = 236/327 (72%), Gaps = 7/327 (2%) Strand=Plus/Plus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| ||||| || |||||||| |||||||||||||||||| | ||||| ||||| || | Sbjct 317 ACGGCAAGCTCAGTTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTTCCCT 376 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGG 24939 |||| ||||| |||||||| |||||||||| | | || | || || ||| ||| Sbjct 377 TCAACATCGCCAGCTACGCATTGCTGACCCACATGCTGGCCCAGCAATGCGACCTGCAGG 436 Query 24940 TCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGG 24999 | || || ||| ||||||||||||||||| |||| | || ||||| ||| |||| Sbjct 437 TGGGTGACTTCGTCTGGACCGGCGGCGACTGCCACATCTACAACAACCATTTCGCCCAGG 496 Query 25000 -CGACCGA-ACAACTGTCGCGCACGCACACGGGCTATCCGTGGCTGGCGCTGAATCACCG 25057 ||| || || ||| ||||| || | | ||| ||| |||| | | || | ||| Sbjct 497 TCGA--GACCCAGCTGGCGCGCCAGCCCTTCGCCTACCCGACGCTGCAGATCAAGCGCCG 554 Query 25058 ---CGACTCGATCTTCGAGTACACCGCCGACGACGTCATATTCCTCGGCTACCGGCCGCA 25114 |||||| ||||||| ||| ||| ||| || || ||||||||| || || Sbjct 555 GCCCGACTCCATCTTCGGCTACGAGTACGAGGACTTCGAGGTCGTCGGCTACCAGCACCA 614 Query 25115 CCCGGTCATCAAGGCCCCCGTGGCCGT 25141 | | ||||||||||||||||||||| Sbjct 615 CGAGCCCATCAAGGCCCCCGTGGCCGT 641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164151737040192