Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq9826 208 2e-49 >seq9826 Length=41569 Score = 208 bits (230), Expect = 2e-49 Identities = 207/268 (77%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 21313 CCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACC 21372 ||| ||||| | ||||||||||| ||||| |||||||||||| || ||||| || || Sbjct 239 CCCGGTGATTGCCCTGTCGCAGCTTAACCGTGGCCTGGAGCAGCGCCCTAACAAACGCCC 298 Query 21373 GATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTT 21432 ||| | || ||| ||||||| |||||||| ||||||||||||||||| | |||||||| Sbjct 299 GATCAACTCCGACTTGCGCGAATCCGGGGCAATCGAGCAGGACGCCGACATCATCATGTT 358 Query 21433 CGTGTACCGCGACGAGGTCTACCACCCGGATACCCAGTACCGCGGCGTGGCTGAGTTGAT 21492 ||| |||||||||||||| || ||||| || ||| ||||| |||||||| || | || Sbjct 359 CGTTTACCGCGACGAGGTGTATCACCCCGAGACCGAGTACAAGGGCGTGGCCGAAATCAT 418 Query 21493 CATCGCGAAGCACCGCAACGGCGAGCCAAGCACTGTTCGGTGCGCGTTCCTGGGTAAGTA 21552 |||| ||||| || |||||| || | || | ||| ||||| || || |||| Sbjct 419 TATCGGCAAGCAGCGTAACGGCCCGCTGGGTACGGCACGGCTGGCGTTTCTCGGCAAGTT 478 Query 21553 CTCGCGATTCGAGCAGCTCGCTCCGGGC 21580 |||||| || ||| | ||||| |||||| Sbjct 479 CTCGCGCTTTGAGAACCTCGCACCGGGC 506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157090243128456