Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq1102 109 2e-19 seq9826 105 2e-18 >seq1102 Length=1192 Score = 109 bits (120), Expect = 2e-19 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 38354 CACTCCCTCTGCCAACGCCTGCTCTTCGCTGATGTCCTGCAGGCGCTCGACGCGAACAGC 38413 ||| |||||||| ||| | || ||||||||||||||||||||||||| ||| || || Sbjct 392 CACGCCCTCTGCTGCCGCGTCCTGATCGCTGATGTCCTGCAGGCGCTCGATGCGCACGGC 451 Query 38414 GGTGATCTCCAGCAGGATGCGGGAGGCCCAGCGGGGCATGTGGATACTTGGCTTCCAT 38471 |||| || ||| ||| ||| ||||||||| ||||||||||| || ||||||||| Sbjct 452 CTTGATGTCGAGCGTGATACGGCTGGCCCAGCGCGGCATGTGGATGCTCGGCTTCCAT 509 >seq9826 Length=41569 Score = 105 bits (116), Expect = 2e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45524 TGTCCTGTGCTTCCCCTCTGCCAGCTCAACCGAGGTTGCGAGTCTCGCCCCGACAAGCGT 45583 || || ||| || |||| | ||||| ||||| || ||| ||||| |||| || Sbjct 237 TGCCCGGTGATTGCCCTGTCGCAGCTTAACCGTGGCCTGGAGCAGCGCCCTAACAAACGC 296 Query 45584 CCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCCATTGAGCAAGACGCCGACATCGTCATG 45643 ||| || | |||| ||||||| ||||| || || ||||| |||||||||||| ||||| Sbjct 297 CCGATCAACTCCGACTTGCGCGAATCCGGGGCAATCGAGCAGGACGCCGACATCATCATG 356 Query 45644 TTCGTGTACCGCGATGAAGTCTATTTCCCGAACAGCGACAGGAAGGGTATCGGCGAAATC 45703 ||||| |||||||| || || ||| ||| | | ||| ||||| | | ||||||| Sbjct 357 TTCGTTTACCGCGACGAGGTGTATCACCCCGAGACCGAGTACAAGGGCGTGGCCGAAATC 416 Query 45704 CTGATCCGGAAGAACCGGGACGG 45726 | ||| | ||| | || |||| Sbjct 417 ATTATCGGCAAGCAGCGTAACGG 439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172733035939728