Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq9558 84.2 2e-11 >seq9558 Length=35122 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 29881 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 29940 || |||| ||||| || || | | ||||||||||||||| ||||| || || || Sbjct 419 TGGGCCAGCATGTGGGTCAGCAATGCGTAGCTGGCGATGTTGAAGGGAACGCCCAGGAAG 360 Query 29941 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGA 30000 |||||| | | |||||| ||||| || ||||| |||||| ||| || ||||| Sbjct 359 ATGTCCGCGCTGCGCTGGTACAGCTGGCAACTGAGCTTGCCGTCGGCCACATAGAACTGG 300 Query 30001 CACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCAC 30060 | | || |||||| || || ||||| | || ||| ||||||||||| Sbjct 299 AAGAAGGCGTGGCAGGGCATGAGCGCCATCTGCGGCAGGTCGGCCACGTTCCAGGCGCTG 240 Query 30061 ACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA 30094 ||||||||||| | | || |||||| || ||| Sbjct 239 ACGATGATGCGGCGGCTGTCCGGGTTGCTCTTGA 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408563795788292