Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq2361 183 1e-41 >seq2361 Length=2839 Score = 183 bits (202), Expect = 1e-41 Identities = 243/333 (73%), Gaps = 6/333 (2%) Strand=Plus/Plus Query 25944 GCCGATCATCTGCATGGTTCCGCCAACGTTGACCACAATTTCAGTGGTGTAGCGCTCAAC 26003 ||| | || ||||||||| || | || ||| | ||||| ||||||||||||| ||| Sbjct 1966 GCCAAGCAGCTGCATGGTGCCCTGCATGTCGACGATGATTTCGGTGGTGTAGCGCTTAAC 2025 Query 26004 GCCGTCCTTTTCCCACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACCTTT 26063 |||||| |||||||||| |||||| | ||| | ||||| || || ||||| |||||||| Sbjct 2026 GCCGTCTTTTTCCCACTCGCGGGTCTGCAGCTTGCCCTCGATATATACCTGCGAACCTTT 2085 Query 26064 CTTCAGGTACTCGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCCATTC 26123 |||||||||||| || ||||| || |||||||| |||||| || || ||||| || Sbjct 2086 GCGCAGGTACTCGCCAGCAATCTCGGCAACCTTGCCGAACAGCGACACACGGTGCCACTC 2145 Query 26124 TGTCACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCA--GCTTTCTGAGGTCGCTACG 26181 || || ||| | ||| |||||||| ||| |||| ||| || |||||| | | Sbjct 2146 GGTTTTCTCGACCTTCTGGCCAGTCTGCTTGTCGGTCCACTGCTCGCT--GGTCGCCAGG 2203 Query 26182 GTAATGTTGGCGACTGCGCCGCCATTAGGCATGTAACGGATCTCTGGATCGT-TCCCCAG 26240 | | ||||| ||| ||| ||| | |||| ||| || | || || || | ||| ||| Sbjct 2204 CTCAGGTTGGTGACCGCGTTGCCGCTTGGCAGGTAGCGAGTTTCCGGGTCCTGTCCGCAG 2263 Query 26241 GTTACCGACAAGGATTACTTTATTTACGCCGCG 26273 | | ||||| || || ||||| || || || || Sbjct 2264 G-TGCCGACCAGAATGACTTTGTTAACCCCACG 2295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159797095801464