Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq9826 136 8e-28 >seq9826 Length=41569 Score = 136 bits (150), Expect = 8e-28 Identities = 279/414 (67%), Gaps = 3/414 (1%) Strand=Plus/Plus Query 24948 CGCGAACAGGGCAGTATTGACTTGGTGATTGTCGATTATTTGCAGCTTATGCGAATTGAA 25007 |||||||| || |||| | || | || ||||| || ||||||| |||| ||| Sbjct 99 CGCGAACACGGTGAGATTGGCCTGATCATGGTCGACTACCTGCAGCTGATGCAGATTCCT 158 Query 25008 GGGTTCAAAGAAGGC---CGAGCTAATGAAGTATCAGAAATTTCGAAATCACTTAAATCC 25064 || | || | | | |||| ||||| | || ||||| || || || ||| || Sbjct 159 GGCTCCAGCGGCGACAGTCGAGTGAATGAGATTTCCGAAATCTCCCGCTCGCTCAAAGCC 218 Query 25065 ATGGCGAAAGAATTTAATTGTCCAATGATCGCGTTATCACAGCTTAACCGAGGTCTTGAA 25124 |||| |||||||| || || || |||| || | || ||||||||||| || || || Sbjct 219 CTGGCCAAAGAATTCAACTGCCCGGTGATTGCCCTGTCGCAGCTTAACCGTGGCCTGGAG 278 Query 25125 AACAGACAGGATAAGCGCCCAATTAACTCAGACTTGCGCGAGTCTGGCGCGATAGAACAG 25184 | | | | || ||||| || ||||| ||||||||||| || || || || || ||| Sbjct 279 CAGCGCCCTAACAAACGCCCGATCAACTCCGACTTGCGCGAATCCGGGGCAATCGAGCAG 338 Query 25185 GATGCTGATCTAATCGCATTGATATACCGAGACGAAGTGTATAACCCCGACAGCTCTGAC 25244 || || || | ||| || | ||||| ||||| |||||| ||||||| | | || Sbjct 339 GACGCCGACATCATCATGTTCGTTTACCGCGACGAGGTGTATCACCCCGAGACCGAGTAC 398 Query 25245 AAAGGCATTGCCGAGATTATCATTGGCAAACACAGGAATGGCGAGCTAGGCACAGTGAGA 25304 || ||| | ||||| || || || ||||| || | || ||| ||| || || | | Sbjct 399 AAGGGCGTGGCCGAAATCATTATCGGCAAGCAGCGTAACGGCCCGCTGGGTACGGCACGG 458 Query 25305 GCGGCATTCATTGGGCAGTACACGCGATTTGAAAACCTATCACCAGAGAGCTAT 25358 ||| || | || ||| | |||| ||||| ||||| |||| | |||||| Sbjct 459 CTGGCGTTTCTCGGCAAGTTCTCGCGCTTTGAGAACCTCGCACCGGGCAGCTAT 512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101516574006144