Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq2361 118 4e-22 >seq2361 Length=2839 Score = 118 bits (130), Expect = 4e-22 Identities = 206/299 (69%), Gaps = 3/299 (1%) Strand=Plus/Minus Query 9973 GTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCCG 10032 || ||||||||||| || ||||||| ||| ||||||||||| |||||||| || Sbjct 2289 GTTAACAAAGTCATTCTGGTCGGCACCTGCGGACAGGACCCGGAAACTCGCTACCTGCCA 2230 Query 10033 AGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAAGGACAAGGCG 10092 |||||| |||| || ||||| | |||| || || | ||| | | | |||||| | Sbjct 2229 AGCGGCAACGCGGTCACCAACCTGAGCCTGGCGACCAGCGAGCAGTGGACCGACAAGCAG 2170 Query 10093 AGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGGCCGCCTCGCC 10152 | ||| ||| | || ||||| |||||||| || | |||||| | ||| Sbjct 2169 ACTGGCCAGAAGGTCGAGAAAACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCC 2110 Query 10153 GAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGAGGGCCGCATCCGC 10212 ||||| | | ||||||||||||||| || ||| ||| || ||||||||| | | Sbjct 2109 GAGATTGCTGGCGAGTACCTGCGCAAAGGTTCGCAGGTATATATCGAGGGCAAGCTGCAG 2050 Query 10213 ACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCGAGATCGTCGCCGA 10271 || || |||| ||| || | |||| | |||||||| ||||| ||| ||| ||| Sbjct 2049 ACCCGCGAGTG---GGAAAAAGACGGCGTTAAGCGCTACACCACCGAAATCATCGTCGA 1994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197763424191432