Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq10485 149 5e-31 seq10777 140 3e-28 seq10493 113 4e-20 >seq10485 Length=261005 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101240 TTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299 ||||||||||| | ||||| ||| || ||||| || || ||||| || || ||||| ||| Sbjct 98119 TTTCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCG 98060 Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGC 101359 | |||| | |||| || | ||| || || || || || ||||||||||| || || Sbjct 98059 CTAAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAGATGAAACGCTGTTGGTCTGGG 98000 Query 101360 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCC 101419 ||||||||||| || ||||||||||| ||| ||| | || | ||||| | ||| Sbjct 97999 GGAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCA 97940 Query 101420 ACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| ||||||| ||||| ||||| | || || ||||| || ||||| Sbjct 97939 ACTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCAT 97890 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | ||||| ||| | |||||||| || ||||| || || ||||| ||| Sbjct 97662 TTCCTCCTCTGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGC 97603 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | |||| | |||| || | ||| ||||| || || || ||||||||||| || || | Sbjct 97602 TCAGGGTTCGGCCATCTTCGAGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTCTGGGG 97543 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||||||||| || ||||||||||| ||| ||| |||| | || || | || | Sbjct 97542 GAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTTTCGATCGTATCGCTAGGCTCAA 97483 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| || |||| || ||||| || | ||||| ||||| || ||||| Sbjct 97482 CTTCTAGGGTGATAGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 97434 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | ||||| ||| || ||||| || || ||||| || || ||||| ||| Sbjct 97890 TTCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGC 97831 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | |||| | |||| || | || || || || || || | || ||||| || || | Sbjct 97830 TAAGGGTTCGGCCATCTTCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGG 97771 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||||||||| || ||||||||||| ||| ||| | || | ||||| | ||| | Sbjct 97770 GAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAA 97711 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| ||||||| ||||| ||||| | || || ||||| || ||||| Sbjct 97710 CTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCAT 97662 >seq10777 Length=1546546 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||||| | ||||| ||| | |||||||| || ||||| || || ||||| ||| Sbjct 767694 TTCCTCCTCGGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGC 767635 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | |||| | |||| || | || || || || || || ||||||||||| || || | Sbjct 767634 TTAGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTCTGGGG 767575 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||||||||| || ||||||||||| ||||||| | || | |||||| | || | Sbjct 767574 GAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTCTCGATCGTGTCACTAGGCTCGA 767515 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||| || |||| ||||| || || | ||||| ||||| || |||||| Sbjct 767514 CTTCTAGGGTGATAGTTTTACCAGTGAGTGTTTTCACAAAGATTTGCATG 767465 >seq10493 Length=264610 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||| | | ||||| ||| | |||||| || || || || || || ||||| || Sbjct 49511 TTCCTCCACGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAC 49452 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | | || || | |||||| || || || || | | ||||| ||||||| Sbjct 49451 TCAGTGTGCGTCCGTCTTCGAGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGCG 49392 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 ||||||||||||| || |||||||| || ||| |||| | || || || ||| | Sbjct 49391 GAATGCCTTCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTATCGCTCGGTTCGA 49332 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | || | ||||| ||||| ||||| | ||| || ||||| ||||||||| Sbjct 49331 CCTCTAAAGTGATGGTTTTTCCGGTCAGAGTCTTCACAAAGATCTGCATG 49282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396226220537028