Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq9558 127 6e-25 >seq9558 Length=35122 Score = 127 bits (140), Expect = 6e-25 Identities = 410/629 (65%), Gaps = 8/629 (1%) Strand=Plus/Plus Query 45608 GAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTG 45667 |||||||| ||||| | ||||| | || || |||| |||||||| || Sbjct 22 GAACTGCTGTGGTTCCTGCGCGGCGACAGCAACGTGCGCTGGCTGCAGGAGCGCGGCTGC 81 Query 45668 ACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAA 45727 || || ||| |||| ||||| || ||||||| || ||||| ||||||||| |||| Sbjct 82 ACCATCTGGAACGAATGGGCACGCGAGGACGGCGACCTGGGCCCGGTCTACGGCGTGCAA 141 Query 45728 TGGCGGTCGTGGAAAGGGGCTGACGG-GAAAACGGTCGACCAAATTGCGGCGGTCTTTAA 45786 ||||| ||| | | ||||| | || ||||||| || || | || | || Sbjct 142 TGGCGCAACTGGCCCACGCCGGACGGCGGCCACA-TCGACCAGATCGCCGAAGTGGTCAA 200 Query 45787 GGAAATCAAGCGCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAA 45846 | | ||||| |||||||| || || || | | || ||||| ||||||||||| | Sbjct 201 GCAGCTCAAGAGCAACCCGGACAGCCGCCGCATCATCGTCAGCGCCTGGAACGTGGCCGA 260 Query 45847 GTTGGGGGAAATGAAGTTGCCCCCATGTCATTACGCCTTTCAGTTTTACGTCGCGAATGG 45906 || | | ||| | | || || || | ||| ||||| || || || | || Sbjct 261 CCTGCCGCAGATGGCGCTCATGCCCTGCCACGCCTTCTTCCAGTTCTATGTGGCCGACGG 320 Query 45907 CCGGTTGTCATGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAA 45966 | | | ||| | | | ||||| | || | || || || | || || || Sbjct 321 CAAGCTCAGTTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTTCCCTTCAA 380 Query 45967 CATCGCTAGCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTCGG 46026 |||||| ||||| || || |||| || ||| | ||||| ||||||||||| | || || Sbjct 381 CATCGCCAGCTACGCATTGCTGACCCACATGCTGGCCCAGCAATGCGACCTGCAGGTGGG 440 Query 46027 CGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAG-CGA 46085 || || | | |||||||||||| ||| | ||||| || ||| | | || | ||| Sbjct 441 TGACTTCGTCTGGACCGGCGGCGACTGCCACATCTACAACAACCATTTCGCCCAGGTCGA 500 Query 46086 AACTGCAGCTGACGCGCGAGCC--GCGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCC 46143 || |||||| ||||| |||| |||| | |||| ||| |||||| || ||| Sbjct 501 GAC-CCAGCTGGCGCGCCAGCCCTTCGCCTAC--CCGACGCTGCAGATCAAGCGCCGGCC 557 Query 46144 GCCGTCTATCTTTGACTATGAATACGAGGATTTTGAATTTGTCGGCTATGACCCGCACCC 46203 || ||||| | ||| || |||||||| || || | |||||||| | | ||| Sbjct 558 CGACTCCATCTTCGGCTACGAGTACGAGGACTTCGAGGTCGTCGGCTACCAGCACCACGA 617 Query 46204 GGCGATTAAGGCTCCTGTATCCGTTTGAG 46232 | | || ||||| || || |||| |||| Sbjct 618 GCCCATCAAGGCCCCCGTGGCCGTCTGAG 646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157730161018056