Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq9558 105 1e-17 >seq9558 Length=35122 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 122787 ACATCGACCAAATCAGCAAGGTCATGGAACAACTGAAAAACGACCCGGACAACCGCCGTA 122846 |||||||||| ||| | | || | | || || || | | ||||||||| |||||| | Sbjct 173 ACATCGACCAGATCGCCGAAGTGGTCAAGCAGCTCAAGAGCAACCCGGACAGCCGCCGCA 232 Query 122847 TCATCGTCAGTGCCTGGAACGTGGCTGACCTGGATGAAATGGCGTTAGCACCATGCCATG 122906 |||||||||| |||||||||||||| |||||| | |||||| | || ||||| | Sbjct 233 TCATCGTCAGCGCCTGGAACGTGGCCGACCTGCCGCAGATGGCGCTCATGCCCTGCCACG 292 Query 122907 CCTTCTTCCAGTTCTA 122922 |||||||||||||||| Sbjct 293 CCTTCTTCCAGTTCTA 308 Score = 104 bits (114), Expect = 4e-17 Identities = 210/309 (68%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 123077 TGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTGCCTCT 123136 || |||||||| |||||||| || ||||| ||||| ||||| || || ||||| ||| Sbjct 331 TGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTTCCCTTCAACATCGCCAGC 390 Query 123137 TACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGACTTCGTG 123196 ||||| | |||| |||||| | |||||||| | | || || ||||||||||| Sbjct 391 TACGCATTGCTGACCCACATGCTGGCCCAGCAATGCGACCTGCAGGTGGGTGACTTCGTC 450 Query 123197 TGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGGCAGATTTGCAGTTA 123256 ||||| || || || || | ||| |||||| | | |||| || ||| | Sbjct 451 TGGACCGGCGGCGACTGCCACATCTACAACAACCATTTCGCCCAGGTCGAGACCCAGCTG 510 Query 123257 ACTCGCGAACCTCATCCGTTACCACA-ACTGCGGATTAAACGTCGTCCGGATTCTATCTT 123315 | ||| | || | || |||| | |||| ||| || || || || || || ||||| Sbjct 511 GCGCGCCAGCC-CTTCGCCTACCCGACGCTGCAGATCAAGCGCCGGCCCGACTCCATCTT 569 Query 123316 CGACTATAAGTTTGAAGATTTCGAAGTGGTCGGATACGAATCGCATGACGCTATTAAGGC 123375 || ||| ||| || || ||||| || ||||| ||| | || || | || ||||| Sbjct 570 CGGCTACGAGTACGAGGACTTCGAGGTCGTCGGCTACCAGCACCACGAGCCCATCAAGGC 629 Query 123376 ACCGGTGGC 123384 || ||||| Sbjct 630 CCCCGTGGC 638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777526980798400