Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq10768 147 1e-29 seq10777 105 4e-17 seq10485 104 2e-16 >seq10768 Length=1303713 Score = 147 bits (162), Expect = 1e-29 Identities = 542/827 (66%), Gaps = 38/827 (5%) Strand=Plus/Plus Query 475365 CAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTAT--CATG 475422 |||| || ||||| | ||||||||||| ||||| ||||| || | || ||| ||| Sbjct 223826 CAACTGCAGGAGACACTCATCTTGGTGGAGAAGACTTTGACAACCGGCTGGTAAACCAT- 223884 Query 475423 GTGTGTTGAAGATTTCAAGAGGAAA---AATAAAGT--TGATCTTTCAACATCTGCTAAA 475477 | ||||| ||| |||||||| ||| || |||| ||| | || | || | Sbjct 223885 -TTTGTTGCAGAATTCAAGAGAAAATACAAGAAAGACATGAGC----AAGAACTCCCGTG 223939 Query 475478 GCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACT 475537 ||| | || | | |||||||| ||||| || || ||| | | || || || ||| Sbjct 223940 CCATGA-GAAGATTGAGAACTGCCTGTGAGCGAGCCAAGAGGACCCTGTCATCCAGCACT 223998 Query 475538 CAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACA 475597 || | | | | ||||| || ||||||||||| |||||||||| | || || | Sbjct 223999 GAAGCAAGTATCGAAGTGGACTCTCTTTTTGAGGGAATTGATTTCTACACGAAAATCAGC 224058 Query 475598 AGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTA-GAAAAACAATTGAACCCGTTGA 475656 | || | ||||| || | |||||||| || ||| | | ||| | || | | Sbjct 224059 CGAGCAAGGTTTGAGGACTTGTGTTCTGACCTATTTTTGTCCTGC--TTGGATCCTGTCA 224116 Query 475657 ACAA-GTTCTCAGAGATTCTAAACTTGACAAA---TCACAAGTCCATGAAATTGTTCTTG 475712 |||| | ||| || ||| |||| || | || | ||| ||||||| | || || | Sbjct 224117 ACAAAGCTCTGAGTGATGCTAAG-TTCAGTAAGAGTGACA--TCCATGAGGTGGTCCTGG 224173 Query 475713 TAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAA-ATGCTTTCATCATATTTTAATGGT 475771 | || || || || | | || || || |||| |||||| ||| |||| ||| Sbjct 224174 TTGGTGGATCTACTCGTGTACCTAAGATCC-AGAAGATGCTTGAGGAATACTTTAGTGGC 224232 Query 475772 AAAAAGTTAAATGAA--AGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGT 475827 || | | |||| ||| | || |||||||| ||||| || ||||| || || || Sbjct 224233 AAG----TCACTGAACAAGTCCATCAACCCTGATGAGGCTGTGGCTTATGGTGCAGCAGT 224288 Query 475828 CCAAGCAGCTATTTTATCAGGTCAATCAGAC-GAGAAACTAAATAATATTGTACTTGTTG 475886 || ||||| || | ||||| | ||| || || | || || | | || || | Sbjct 224289 TCAGGCAGCCATCCTGTCAGGAGACA-AGAGTGACGAAGTCAAGGATGTGCTTCTGGTAG 224347 Query 475887 ACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTG 475946 | || ||||||| ||| | || |||| |||| |||| | | ||||| || ||||||| Sbjct 224348 ATGTGGCTCCACTCTCACTTGGCATTGAGACAGCAGGAGAGGTGATGACAAAACTTATTG 224407 Query 475947 ACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATC 476006 | |||||| ||| |||||| |||| || | || | || ||||| || || | Sbjct 224408 AAAGAAATGCTCGCATCCCAACCAAAGCCACACAGACCTTCACAACGTATTCCGACAACC 224467 Query 476007 AAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACA 476066 | | | || |||||| | | |||||||| |||||| | | || || | || ||| Sbjct 224468 AGCCTGCAGTGACCATCAGAGTGTTTGAAGGGGAAAGACCACTTACCAAGCACAACAACC 224527 Query 476067 AACTTGGAACTTTTAATCTTGAA-GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATT 476125 || || | || | |||| || || || || || || |||||||| || || ||| Sbjct 224528 TGCTAGGGAAATTCGA-CTTGTCTGGGATCCCACCAGCCCCAAGAGGAGTGCCACAGATT 224586 Query 476126 GAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 || || || |||||||||||||| || || || || ||||| |||| Sbjct 224587 GAGGTGACATTTGATATTGATGCCAACGGCATACTGAATGTGTCTGC 224633 >seq10777 Length=1546546 Score = 105 bits (116), Expect = 4e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || || || ||||| || ||||| | || || || ||| ||| Sbjct 767686 CGGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTTAGGGTT 767627 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||||||||| || ||||| || ||||| | ||| ||||| || || ||||| ||| Sbjct 767626 CGGCCATCTTCAAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCT 767567 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 |||||||||||||| || ||| ||| || || || ||| | | ||| ||| Sbjct 767566 TCCTTGTCTTGAATTTTCGCTTTTACATTCTCGATCGTGTCACTAGGCTCGACTTCTAGG 767507 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||||||||| ||||| || || || || ||||| Sbjct 767506 GTGATAGTTTTACCAGTGAGTGTTTTCACAAAGATTTG 767469 >seq10485 Length=261005 Score = 104 bits (114), Expect = 2e-16 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAGTTCT 480613 ||||| || || || ||||| || ||||| | || || || ||| || |||| Sbjct 97651 AGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTC-GCTCAGGGTTCG 97593 Query 480614 GTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTC 480673 | |||||| ||||| || ||||| ||||| | ||| ||||| || || ||||| ||||| Sbjct 97592 GCCATCTTCGAGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTC 97533 Query 480674 CTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGT 480733 |||||||||||| || ||| ||| ||| || ||||| | | | ||| ||||| Sbjct 97532 CTTGTCTTGAATTTTAGCTTTCACATTTTCGATCGTATCGCTAGGCTCAACTTCTAGGGT 97473 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || ||||| || || || || ||||| Sbjct 97472 GATAGTCTTGCCAGTGAGTGTTTTCACAAAGATTTG 97437 Score = 93.3 bits (102), Expect = 3e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || |||| | |||||| || || ||||| || || || || |||||||| || || ||| Sbjct 97828 AGGGTTCGGCCATCTTCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGGGA 97769 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT 480725 || ||||||||||||||||| || ||| ||| || || || || | || | | Sbjct 97768 ATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACT 97709 Query 480726 TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| ||||| || ||||| || || ||||| Sbjct 97708 TCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTG 97665 Score = 93.3 bits (102), Expect = 3e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || |||| | |||||| ||||| ||||| || || || | ||| ||||| || || ||| Sbjct 98056 AGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAGATGAAACGCTGTTGGTCTGGGGGA 97997 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT 480725 || ||||||||||||||||| || ||| ||| || || || || | || | | Sbjct 97996 ATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACT 97937 Query 480726 TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| ||||| || ||||| || || ||||| Sbjct 97936 TCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTG 97893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267715764018992