Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_020205.1 Length=42963 Score E Sequences producing significant alignments: (Bits) Value seq2361 100 8e-17 >seq2361 Length=2839 Score = 100 bits (110), Expect = 8e-17 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 34867 GATGTCGGTGGTGTAGTGCGTCACGCCTTCCTTTTCGTACTTGCCGTAACGGATCATGCC 34926 ||| |||||||||||| || | ||||| || ||||| ||| || | | | | |||| Sbjct 2002 GATTTCGGTGGTGTAGCGCTTAACGCCGTCTTTTTCCCACTCGCGGGTCTGCAGCTTGCC 2061 Query 34927 CGCCACCGCGATCTTCGAACCCTTGCGCAAGTATTCGCCGGCAATCTCGGCCAGCTTCCC 34986 | | | | || |||||| ||||||| ||| ||||| ||||||||||| | ||| || Sbjct 2062 CTCGATATATACCTGCGAACCTTTGCGCAGGTACTCGCCAGCAATCTCGGCAACCTTGCC 2121 Query 34987 GAAGAACACCACCCGGTGCCACTGGGTTTCTTCGACCT 35024 ||| | | ||| |||||||||| ||||| ||||||| Sbjct 2122 GAACAGCGACACACGGTGCCACTCGGTTTTCTCGACCT 2159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137342377055400