Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq2361 143 7e-30 >seq2361 Length=2839 Score = 143 bits (158), Expect = 7e-30 Identities = 190/264 (72%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 25828 CCACTTGCGCGTGCGCAACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTC 25887 ||||| ||| || ||| |||||| || || || | || || |||||||| |||||| Sbjct 2038 CCACTCGCGGGTCTGCAGCTTGCCCTCGATATATACCTGCGAACCTTTGCGCAGGTACTC 2097 Query 25888 GCCGGCCACCTCTGCCAACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTAC 25947 ||| || | ||| || | ||| ||| | | | |||||||||||||| ||||| || || Sbjct 2098 GCCAGCAATCTCGGCAACCTTGCCGAACAGCGACACACGGTGCCACTCGGTTTTCTCGAC 2157 Query 25948 CGGCTGCCCTGTCTGCTTGTCTTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCAC 26007 | ||| || ||||||||||| | ||||||| ||||| || | ||| | || | || Sbjct 2158 CTTCTGGCCAGTCTGCTTGTCGGTCCACTGCTCGCTGGTCGCCAGGCTCAGGTTGGTGAC 2217 Query 26008 GGCGGTACCGTTAGGCATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGAT 26067 ||| | ||| | |||| || | | |||||||||||| || || ||||||| | || Sbjct 2218 CGCGTTGCCGCTTGGCAGGTAGCGAGTTTCCGGGTCCTGTCCGCAGGTGCCGACCAGAAT 2277 Query 26068 TACCTTGTTAATTCCGCGTGCCAT 26091 || ||||||| || || ||||| Sbjct 2278 GACTTTGTTAACCCCACGGGCCAT 2301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123644934628512