Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_021311.1 Length=76479 Score E Sequences producing significant alignments: (Bits) Value seq3329 129 3e-25 >seq3329 Length=3274 Score = 129 bits (142), Expect = 3e-25 Identities = 302/450 (67%), Gaps = 7/450 (2%) Strand=Plus/Minus Query 66987 GTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGT 67046 |||||||| ||||| || || ||| || ||| |||||||||| || || ||| | Sbjct 996 GTTGACTCCGTGGCAGCACTAACGCCCAAAGCTGAGATCGAAGGCGAAATGGGTGACTCT 937 Query 67047 CACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACCGGCACCAT- 67105 || ||||||||||| ||||| | ||||||||||| |||| || |||||||| | | | Sbjct 936 CATGTCGGCCTGCAAGCGCGTTTGATGTCACAGGCGCTGCGTAAACTCACCGGTAACGTA 877 Query 67106 CTCCAGCACCAACACGCTGAC-GCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACG 67164 ||| | ||| ||| || | | |||||||| | || ||| || || | Sbjct 876 AAACAG-TCGAAC-TGCTTACTAGTATTCATCAACCAGATTCGTATGAAAATTGG---TG 822 Query 67165 TGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAG 67224 || | ||| ||| || || || ||||| || || ||| |||||||| || | Sbjct 821 TGATGTTTGGCAGCCCTGAAACGACGACTGGCGGTAACGCACTGAAATTCTACGCGTCTG 762 Query 67225 TCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACC 67284 | || ||||| | ||||| |||| | | | |||| | || ||||||| || || ||| Sbjct 761 TTCGTCTGGATATTCGTCGTATCGGCTCTGTGAAGCAGGGTGATGAGGTGGTGGGTAACG 702 Query 67285 GCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCT 67344 ||||| ||||| || || || ||||| | | |||||| | | | ||||||||| Sbjct 701 AAACCCGCGTGAAAGTGGTGAAAAACAAAGTATCACCGCCGTTCAGACAAGCCGAGTTCC 642 Query 67345 CCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGC 67404 | |||| || ||||||||| || || |||| || | ||| ||| ||| | Sbjct 641 AGATTCTGTATGGTCAGGGCATCTACCGAATGGGCGAAGTCATTGACTTGGGCGTTCAGA 582 Query 67405 AGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 67434 | || | ||| | ||||| || || |||| Sbjct 581 ACGGTTTAGTGGATAAGTCTGGTGCTTGGT 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244575791547360