Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq2361 86.0 2e-12 >seq2361 Length=2839 Score = 86.0 bits (94), Expect = 2e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 33184 AACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCGGAAGTTAAATATATGCCTTCT 33243 |||||||| || | | ||||| |||||| ||||||||| | || |||| Sbjct 2286 AACAAAGTCATTCTGGTCGGCACCTGCGGACAGGACCCGGAAACTCGCTACCTGCCAAGC 2227 Query 33244 GGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATAAAGCA-AC 33302 ||| ||| || ||| ||| ||||| || |||||||||| ||| || ||| || Sbjct 2226 GGCAACGCGGTCACCAACCTGAGCCTGGCGACCAGCGAGCAGTGGACCGACAA-GCAGAC 2168 Query 33303 AGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGCTGGCAGA 33362 || | ||| ||| | || || ||||| || ||| | ||||| ||| | || || Sbjct 2167 TGGCCAGAAGGTCGAGAAAACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGA 2108 Query 33363 GGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAA 33413 | | |||||||| |||||||||||||| || ||||| ||| | || || || Sbjct 2107 GATTGCTGGCGAGTACCTGCGCAAAGGTTCGCAGGTATATATCGAGGGCAA 2057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152025293032272