Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_021804.1 Length=28760 Score E Sequences producing significant alignments: (Bits) Value seq2493 125 1e-24 >seq2493 Length=2841 Score = 125 bits (138), Expect = 1e-24 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 26447 AGGAAATAGAGAGCAGGAAATTAGCGGTATATCAAGAAGGTTAAAAATGTTAGCTAAAGA 26506 ||||||| | ||||| |||||| ||| ||||||| |||||| | || ||||| Sbjct 2688 AGGAAATCGTGAGCAAGAAATTTCTACTATTTCAAGAAACTTAAAAGCACTTGCAAAAGA 2629 Query 26507 ACTGCAGGTGCCTATAATTGCTTTATGTCAATTATCTAGGGCTGTAGAAACTCGTGGTGG 26566 | | || || | ||||| | | ||| | ||| | || || ||||| |||||| Sbjct 2628 GTTAAACGTACCAGTTATTGCACTTTCTCAGCTTTCTCGTGCCGTTGAAACACGTGGTTC 2569 Query 26567 TTCTAAACGTCCTTTGTTATCAGATTTGCGTGAATCAGGTGCAATAGAGCAGGATGCAGA 26626 | ||| | ||||| | || |||||| | ||||| || ||||| ||||| ||||| || Sbjct 2568 TAGTAAGAGACCTTTACTTTCCGATTTGAGGGAATCTGGAGCAATTGAGCAAGATGCCGA 2509 Query 26627 TATAGTAGAGTTTATTTATAGACCAGATTATTATAAAATAGA 26668 ||| ||| |||||||||||||||||| ||||||||||| || Sbjct 2508 TATTGTATCGTTTATTTATAGACCAGAATATTATAAAATTGA 2467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91898608125456