Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22]
10,804 sequences; 356,613,585 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq10777 116 3e-21
seq10493 100 3e-16
>seq10777
Length=1546546
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | ||||| || || ||||||||||| || || ||||| || | |
Sbjct 767466 ATGCAAATCTTTGTGAAAACACTCACTGGTAAAACTATCACCCTAGAAGTCGAGCCTAGT 767525
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | |||||| || || |||||||| ||||| || || || || |||
Sbjct 767526 GACACGATCGAGAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAA 767585
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||||| || || ||||| |||||||| || ||| ||| | | || || |||
Sbjct 767586 CAGCGTTTAATTTTCGCCGGAAAACAGCTTGAAGATGGCCGAACCCTAAGCGACTACAAC 767645
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || || || ||||| || ||| |||| | || | || |||||
Sbjct 767646 ATCCAGAAAGAGTCGACCCTTCACCTGGTTCTACGTCTCCGAGGAGG 767692
>seq10493
Length=264610
Score = 100 bits (110), Expect = 3e-16
Identities = 170/242 (70%), Gaps = 7/242 (3%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || || || || || || | ||||| ||| | |
Sbjct 50651 ATGCAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 50710
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || ||| ||||||||||||||||| || || || || || |||
Sbjct 50711 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAA 50770
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881
|| | |||||||||||||| || || || || || ||| | || || || || |
Sbjct 50771 CAGAGGTTGATCTTTGCCGGCAAGCAACTTGAAGACGGTCG-CACAC-TGAGCGACTACA 50828
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG---CGGAACTG 24938
|||| || ||||| || ||||| || |||| | || | || ||||| | ||||||
Sbjct 50829 ACATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGCCTTCGTGGAGGAAACTGAACTG 50888
Query 24939 AG 24940
||
Sbjct 50889 AG 50890
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || || || || || || | ||||| ||| | |
Sbjct 50195 ATGCAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 50254
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || ||| ||||||||||||||||| || || || || || ||
Sbjct 50255 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 50314
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881
||| | |||||||| ||||| || || || || || ||| | || || || || |
Sbjct 50315 CAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCG-CACAC-TGAGCGACTACA 50372
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||| || ||||| || ||||| || |||| | || | || |||||
Sbjct 50373 ACATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCGTGGAGG 50421
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| ||||| || || | || || ||| | | |
Sbjct 49283 ATGCAGATCTTTGTGAAGACTCTGACCGGAAAAACCATCACTTTAGAGGTCGAACCGAGC 49342
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| || || || || || ||||||||||| || || ||||| |||
Sbjct 49343 GATACGATCGAAAATGTGAAGGCGAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 49402
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882
||| | | ||||| ||||| || || || || || || ||| || || || ||
Sbjct 49403 CAAAGACTTATCTTCGCCGGCAAGCAACTCGAAGA-CGGACGCACACTGAGTGACTACAA 49461
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || ||||| || |||| | || | || |||||
Sbjct 49462 CATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCGTGGAGG 49509
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || || || || || | ||||| ||| | |
Sbjct 49511 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 49570
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || ||| ||||||||||||||||| || || || || || ||
Sbjct 49571 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 49630
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882
||| | |||||||| ||||| || || || || || || ||| || || || ||
Sbjct 49631 CAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGA-CGGACGCACACTGAGTGACTACAA 49689
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || ||||| || |||| | || | || |||||
Sbjct 49690 CATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCGTGGAGG 49737
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || || || || || | ||||| ||| | |
Sbjct 49739 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 49798
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || ||| ||||||||||||||||| || || || || || ||
Sbjct 49799 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 49858
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881
||| | |||||||| ||||| || || || || || ||| | || || || || |
Sbjct 49859 CAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCG-CACAC-TGAGCGACTACA 49916
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||| || ||||| || ||||| || |||| | || | || |||||
Sbjct 49917 ACATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGCCTTCGTGGAGG 49965
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || || || || || | ||||| ||| | |
Sbjct 49967 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 50026
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || ||| ||||||||||||||||| || || || || || ||
Sbjct 50027 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 50086
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881
||| | |||||||| ||||| || || || || || ||| | || || || || |
Sbjct 50087 CAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCG-CACAC-TGAGCGACTACA 50144
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||| || ||||| || ||||| || |||| | || | || |||||
Sbjct 50145 ACATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGCCTTCGTGGAGG 50193
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || || || || || | ||||| ||| | |
Sbjct 50423 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 50482
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || ||| ||||||||||||||||| || || || || || ||
Sbjct 50483 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 50542
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881
||| | |||||||| ||||| || || || || || ||| | || || || || |
Sbjct 50543 CAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCG-CACAC-TGAGCGACTACA 50600
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||| || ||||| || ||||| || |||| | || || | |||||
Sbjct 50601 ACATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTGAGAGGAGG 50649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449836841329120
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |