Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq3329 102 4e-17 >seq3329 Length=3274 Score = 102 bits (112), Expect = 4e-17 Identities = 323/492 (66%), Gaps = 9/492 (2%) Strand=Plus/Minus Query 67871 ATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGG 67930 ||| |||| ||||| ||||| || || ||| || ||| ||||||| || || || Sbjct 1002 ATCATTGTTGACTCCGTGGCAGCACTAACGCCCAAAGCTGAGATCGAAGGCGAAATGGGT 943 Query 67931 GACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGC 67990 ||||| || ||||||||||| || || ||||||| ||||| |||| || || ||||| Sbjct 942 GACTCTCATGTCGGCCTGCAAGCGCGTTTGATGTCACAGGCGCTGCGTAAACTCACCGGT 883 Query 67991 A-CGATTGCCAGCACCAACACGCTCACCC-TGTGGGTGAATCAGCTGCGCGAGAAGATCG 68048 | || ||| | ||| ||| || | | | || ||| | || ||| || | Sbjct 882 AACGTAAAACAGT-CGAACT-GCTTACTAGTATTCATCAACCAGATTCGTATGAAAATTG 825 Query 68049 GCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACG 68108 | || | |||| ||| || || || || ||||| || ||| ||||||| Sbjct 824 GTGTGATGTTTGGCAGCCC---TGAAACGACGACTGGCGGTAACGCACTGAAATTCTACG 768 Query 68109 CCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCG 68168 | || || ||| ||||| | || | |||| | | | |||| | || ||||||| || | Sbjct 767 CGTCTGTTCGTCTGGATATTCGTCGTATCGGCTCTGTGAAGCAGGGTGATGAGGTGGTGG 708 Query 68169 GCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTG 68228 | ||| || |||||||| || || || ||||| | | || ||| | | || || | Sbjct 707 GTAACGAAACCCGCGTGAAAGTGGTGAAAAACAAAGTATCACCGCCGTTCAGACAAGCCG 648 Query 68229 AGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCCGAACTCCTCGACATGGCCG 68288 |||| || | || || ||||||| | ||| || |||| || | ||| ||| || Sbjct 647 AGTTCCAGATTCTGTATGGTCAGGGCATCTACCGAATGGGCGAAGTCATTGACTTGGGCG 588 Query 68289 TTTCCCGAGGGCTCA-TCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAACATC 68347 || | | || | | | | |||||||| || |||| | ||| | | | || ||| Sbjct 587 TT-CAGAACGGTTTAGTGGATAAGTCTGGTGCTTGGTACGCGTATAACGGCGATAAAATC 529 Query 68348 GGCCAGGGCAAG 68359 |||||||| ||| Sbjct 528 GGCCAGGGTAAG 517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247417017383232