Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq2017 262 7e-65 seq2285 107 3e-18 >seq2017 Length=1507 Score = 262 bits (290), Expect = 7e-65 Identities = 319/429 (74%), Gaps = 8/429 (2%) Strand=Plus/Minus Query 35454 GTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCC 35513 ||||||||| ||||||||||||||| |||||||| |||||||| || | || ||| | Sbjct 1477 GTCACACCCAGCTGGCCCTGGTATTTGCCGCCGCGGTCCTTGTAGGAAACCTCACAGGCT 1418 Query 35514 TCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGC 35573 || || || ||||||||||||||||||||||| || || ||||| | ||||||| Sbjct 1417 TCATCGGACTGCAAAAACAGCATCTGCGCCACACCCTCATTGGCGTAGATCTTCGCCGGC 1358 Query 35574 AGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGC 35633 | | | || |||||| || ||||| || ||||| ||||||||||| |||||||| || Sbjct 1357 AAGGTAGTGGTGTTGGAAAATTCCAGGGTTACATGGCCTTCCCACTCCGGTTCCAGTGGG 1298 Query 35634 GTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGG 35693 || ||||||||||| || || |||||||||||||||||||| |||| || | || Sbjct 1297 GTGACGTTGACGATAATGCCGCAGCGCGCGTAGGTGCTCTTGCCCAGGCAGATGGTCAGC 1238 Query 35694 ACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGA 35753 |||| ||| |||||||||||| | || || ||||| |||| |||||| ||||||||| Sbjct 1237 ACGTCGCGAGGAATGCGGAAGAACTCCACGGTGCGCGCCAAGGCGAAGGAGTTCGGCGGG 1178 Query 35754 ATCAGGATGCTGTCA--GCCTTAACCGGCTGC-AGGCACTTGGGATCGAAGTTCTTCGGA 35810 || |||| || || || | | | | || ||| |||||||||||||| Sbjct 1177 AT---AATGCACACATCGCTTTTCACATCGACAAAGCTCTTCTCGTCGAAGTTCTTCGGG 1121 Query 35811 TCAACCACTGCGCTGTTGATGTTGGTGAAGACTTCCCACTCATCGGCAGCA-CGCACGTC 35869 || || || |||||||||||| || || | ||||||| || ||| ||||| || Sbjct 1120 TCGACGGTCGCCGAGTTGATGTTGGTAAACACCTTGAACTCATCAGC-GCAGCGCACATC 1062 Query 35870 ATAACCATA 35878 ||||| || Sbjct 1061 GTAACCGTA 1053 >seq2285 Length=2034 Score = 107 bits (118), Expect = 3e-18 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 247008 AGACGTGCGATGATTTCGGAGTTCATGCTGCGATGGTGCGTACGGGCAACGTCCGCGATG 247067 || || || ||||| || |||||||||||||| || || |||| || || ||||| || Sbjct 1270 AGGCGAGCAATGATCTCCGAGTTCATGCTGCGGTGATGGTTACGTGCGACATCCGCAATA 1211 Query 247068 CGTTCGCGCATGCCATCCGGCAAACGCACGACAAACTTGTCGGCGCTGCGGCTG 247121 ||||||||||||||||| |||| ||| || || || ||||| ||| |||||||| Sbjct 1210 CGTTCGCGCATGCCATCAGGCAGACGAACTACGAATTTGTCAGCGGTGCGGCTG 1157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825805259936160