Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq1352 1227 0.0 seq10473 255 1e-63 seq10776 174 4e-39 seq10800 145 2e-30 >seq1352 Length=1244 Score = 1227 bits (1360), Expect = 0.0 Identities = 682/683 (99%), Gaps = 0/683 (0%) Strand=Plus/Minus Query 35271 TGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAT 35330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1244 TGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAT 1185 Query 35331 CTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCC 35390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1184 CTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCC 1125 Query 35391 GGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCC 35450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1124 GGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCC 1065 Query 35451 CGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGT 35510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1064 CGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGT 1005 Query 35511 CGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAAC 35570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1004 CGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAAC 945 Query 35571 AGTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTC 35630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 944 AGTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTC 885 Query 35631 TCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTC 35690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 884 TCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTC 825 Query 35691 TTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGT 35750 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 824 TTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGT 765 Query 35751 ATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTG 35810 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 764 ATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTG 705 Query 35811 AGCGGCATAACCTAAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGT 35870 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 704 AGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGT 645 Query 35871 TCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACT 35930 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 644 TCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACT 585 Query 35931 ATCAATAAGTTGGAGTCATTACC 35953 ||||||||||||||||||||||| Sbjct 584 ATCAATAAGTTGGAGTCATTACC 562 >seq10473 Length=248406 Score = 255 bits (282), Expect = 1e-63 Identities = 142/143 (99%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 35186 GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGC 35245 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 160079 GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTNTGAGGTGCTCCAGTGGC 160020 Query 35246 TTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAA 35305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 160019 TTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAA 159960 Query 35306 AAGCACCGCCGGACATCAGCGCT 35328 ||||||||||||||||||||||| Sbjct 159959 AAGCACCGCCGGACATCAGCGCT 159937 >seq10776 Length=1506508 Score = 174 bits (192), Expect = 4e-39 Identities = 96/96 (100%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 35233 GTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGG 35292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1017034 GTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGG 1016975 Query 35293 TGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCT 35328 |||||||||||||||||||||||||||||||||||| Sbjct 1016974 TGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCT 1016939 >seq10800 Length=2658636 Score = 145 bits (160), Expect = 2e-30 Identities = 80/80 (100%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 35249 TGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAG 35308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2657436 TGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAG 2657495 Query 35309 CACCGCCGGACATCAGCGCT 35328 |||||||||||||||||||| Sbjct 2657496 CACCGCCGGACATCAGCGCT 2657515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127087692874560