Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_022988.1 Length=74210 Score E Sequences producing significant alignments: (Bits) Value seq3329 127 1e-24 >seq3329 Length=3274 Score = 127 bits (140), Expect = 1e-24 Identities = 330/496 (67%), Gaps = 13/496 (3%) Strand=Plus/Minus Query 64986 GTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGT 65045 |||||||| ||||| || || ||| || ||| |||||||||| || || ||| | Sbjct 996 GTTGACTCCGTGGCAGCACTAACGCCCAAAGCTGAGATCGAAGGCGAAATGGGTGACTCT 937 Query 65046 CACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCAT- 65104 || ||||||||||| ||||| | ||||| ||||| |||| || |||||||| | | | Sbjct 936 CATGTCGGCCTGCAAGCGCGTTTGATGTCACAGGCGCTGCGTAAACTCACCGGTAACGTA 877 Query 65105 CTCCAGCACCAACACGCTGAC-GCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACG 65163 ||| | ||| ||| || | | |||||||| | || ||| || || | Sbjct 876 AAACAG-TCGAAC-TGCTTACTAGTATTCATCAACCAGATTCGTATGAAAATTGG---TG 822 Query 65164 TGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAG 65223 || | ||| ||| || || || ||||| || || ||| |||||||| || | Sbjct 821 TGATGTTTGGCAGCCCTGAAACGACGACTGGCGGTAACGCACTGAAATTCTACGCGTCTG 762 Query 65224 TCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACC 65283 | || ||||| | ||||| |||| | | | |||| | || ||||||| || || ||| Sbjct 761 TTCGTCTGGATATTCGTCGTATCGGCTCTGTGAAGCAGGGTGATGAGGTGGTGGGTAACG 702 Query 65284 GCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCT 65343 ||||| ||||| || || || ||||| | | |||||| | | | ||||||||| Sbjct 701 AAACCCGCGTGAAAGTGGTGAAAAACAAAGTATCACCGCCGTTCAGACAAGCCGAGTTCC 642 Query 65344 CCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGC 65403 | |||| || ||||||||| || || |||| || | ||| ||| ||| | Sbjct 641 AGATTCTGTATGGTCAGGGCATCTACCGAATGGGCGAAGTCATTGACTTGGGCGTTCAGA 582 Query 65404 AGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGT---ACGGGGACAAGAACGTCGCCC 65460 | || | ||| | ||||| || || |||| | || |||| || || | ||| || Sbjct 581 ACGGTTTAGTGGATAAGTCTGGTGCTTGGTACGCGTATAACGGCGATAAAA---TCGGCC 525 Query 65461 AGGGCAAGCCCAAGGC 65476 |||| ||| | || || Sbjct 524 AGGGTAAGGCGAATGC 509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237315947604124