Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq548 82.4 7e-11 >seq548 Length=1094 Score = 82.4 bits (90), Expect = 7e-11 Identities = 213/322 (66%), Gaps = 2/322 (1%) Strand=Plus/Plus Query 25459 ATCTGGATCATTCCACGCAAGACTACACTCTGAAGTCGGATCGTAATATTCTGTACATTT 25518 ||| |||||||||||| | | | | ||||| | | || | ||| | ||||| ||||| Sbjct 178 ATCCGGATCATTCCACACTATAGAATGCTCTGCATTTGGGTTATAAAAGTCTGTGCATTT 237 Query 25519 GTATTCAAAATCAGCAATATCACTAATCACAACAAAGCCATGAGCGAAACCAGGAGGAAT 25578 || | || ||||| || || | ||| ||| || || || || || || | Sbjct 238 ATAAACGAACTCAGCGTCTTCGCTTGTGACATAAAAACCGTGTGCAAAGCCTTCTGGCAC 297 Query 25579 CCAAAATTGTGTTTTATTCTTTTCAGATAAGAGAACACCTACCCATTCTCCAAATGTTGG 25638 ||| ||||| ||||||| | | || || | || ||||| | ||||| ||||| Sbjct 298 CCATAATTGCCTTTTATTTTCAGCGGACAAATATTCTCCAACCCACTTCCCAAAAGTTGG 357 Query 25639 ACTACCAACCCTAATATCTACAGCAACATCATAAACTTCACCA-CGAACACAGCGTACCA 25697 | | | | ||||||||| || |||||| | ||||||||| | ||| | ||| | Sbjct 358 AGAGTCTTCACGAATATCTACCGCCACATCAAACACTTCACCAGATATCAC-TCTTACTA 416 Query 25698 ACTTCCCTTGTGGGTTTTTCTTTTGAAAATGAAGCCCACGTAGAACTCCTCGGATAGAAC 25757 |||||||| | ||||| ||||| |||| | || | || || |||| | || Sbjct 417 GTTTCCCTTGAGTGTTTTCTGTTTGATAATGCAATCCTCTTAAAATTCCTTTTCTCGATT 476 Query 25758 GTGAATGGTTATCTTGGACAAA 25779 ||||| |||||||| ||||| Sbjct 477 TGGAATGATTATCTTGAACAAA 498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475366193124480