Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq10493 111 2e-19 seq10777 100 3e-16 seq10485 98.7 1e-15 seq10803 96.9 3e-15 >seq10493 Length=264610 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| |||| || ||| ||| ||| || || |||||||| Sbjct 50391 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACC-GTCTTCAAGTTGCTTGCC 50333 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || |||||||| || ||||| || || ||||| |||||| || Sbjct 50332 GGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTT 50273 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||||| | || || || || | |||| ||| || || || ||||| Sbjct 50272 CACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTTTCCAGTGAGAGT 50213 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| Sbjct 50212 TTTGACGAAAATCTGCAT 50195 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| || | || ||| ||| ||||| |||||||| Sbjct 49479 GTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTGCGTCCGTCTTCGAGTTGCTTGCCG 49420 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582 ||| | || || | || |||||||| || |||||||| ||||| ||| ||| || || Sbjct 49419 GCGAAGATAAGTCTTTGTTGGTCGGGCGGAATGCCTTCTTTGTCC-TGAATTTTCGCCTT 49361 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||| ||| | || || || || | |||| |||||| ||||||||||| Sbjct 49360 CACATTTTCGATCGTATCGCTCGGTTCGACCTCTAAAGTGATGGTTTTTCCGGTCAGAGT 49301 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 49300 CTTCACAAAGATCTGCATG 49282 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| |||| || ||| ||| ||| || || |||||||| Sbjct 49935 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACC-GTCTTCAAGTTGCTTGCC 49877 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || |||||||| || ||||| || || ||||| |||||| || Sbjct 49876 GGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTT 49817 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||||| | || || || || | |||| ||| || || || ||||| Sbjct 49816 CACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTTTCCAGTGAGAGT 49757 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 49756 CTTGACGAAAATCTGCAT 49739 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| |||| || ||| ||| ||| || || |||||||| Sbjct 50163 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACC-GTCTTCAAGTTGCTTGCC 50105 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || |||||||| || ||||| || || ||||| |||||| || Sbjct 50104 GGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTT 50045 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||||| | || || || || | |||| ||| || || || ||||| Sbjct 50044 CACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTTTCCAGTGAGAGT 49985 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 49984 CTTGACGAAAATCTGCAT 49967 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| |||| || ||| ||| ||| || || |||||||| Sbjct 50619 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACC-GTCTTCAAGTTGCTTGCC 50561 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || |||||||| || ||||| || || ||||| |||||| || Sbjct 50560 GGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTT 50501 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||||| | || || || || | |||| ||| || || || ||||| Sbjct 50500 CACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTTTCCAGTGAGAGT 50441 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 50440 CTTGACGAAAATCTGCAT 50423 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| |||| || ||| ||| ||| || || |||||||| Sbjct 50847 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACC-GTCTTCAAGTTGCTTGCC 50789 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | || ||| ||||| || ||||| || || ||||| |||||| || Sbjct 50788 GGCAAAGATCAACCTCTGTTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTT 50729 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||||| | || || || || | |||| ||| || || || ||||| Sbjct 50728 CACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTTTCCAGTGAGAGT 50669 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| Sbjct 50668 TTTGACGAAAATCTGCAT 50651 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| || | || ||| ||| || || |||||||| Sbjct 49707 GTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTGCGTCCGTCTTCAAGTTGCTTGCCG 49648 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | || |||||||| || ||||| || || ||||| |||||| || Sbjct 49647 GCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTTC 49588 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||||| ||||| | || || || || | |||| ||| || || || ||||| Sbjct 49587 ACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTTTCCAGTGAGAGTC 49528 Query 133644 TTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 49527 TTGACGAAAATCTGCAT 49511 >seq10777 Length=1546546 Score = 100 bits (110), Expect = 3e-16 Identities = 146/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || ||||| |||| | || | | | || || ||||| || | Sbjct 767663 GGTCGACTCTTTCTGGATGTTGTAGTCGCTTAGGGTTCGGCCA-TCTTCAAGCTGTTTTC 767605 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | ||| |||| | ||||| ||||| || || |||||||||||||| ||| ||| || Sbjct 767604 CGGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC-TTGAATTTTCGCT 767546 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | ||| | |||||| | ||||| || || | ||||| ||||| || || || Sbjct 767545 TTTACATTCTCGATCGTGTCACTAGGCTCGACTTCTAGGGTGATAGTTTTACCAGTGAGT 767486 Query 133641 GTTTTTACGAAAATCTGCATG 133661 ||||| || || || |||||| Sbjct 767485 GTTTTCACAAAGATTTGCATG 767465 >seq10485 Length=261005 Score = 98.7 bits (108), Expect = 1e-15 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || ||||| |||| || || | | | || ||||| || || | Sbjct 97631 GGTCGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCA-TCTTCGAGTTGTTTAC 97573 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | ||| |||| | ||||| ||||| || || |||||||||||||| ||| ||| || Sbjct 97572 CAGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC-TTGAATTTTAGCT 97514 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | ||| ||| | ||||| || || | ||||| || ||||| || || Sbjct 97513 TTCACATTTTCGATCGTATCGCTAGGCTCAACTTCTAGGGTGATAGTCTTGCCAGTGAGT 97454 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| || || || ||||| Sbjct 97453 GTTTTCACAAAGATTTGCAT 97434 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || ||||| |||| | || | | | || || ||||| || || Sbjct 97858 GTCGACTCTTTCTGGATGTTGTAGTCGCTAAGGGTTCGGCCA-TCTTCTAGCTGTTTTCC 97800 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 ||| | ||||| || || ||||| || || |||||||||||||| ||| ||| || | Sbjct 97799 GGCGAAGATGAGTCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTC-TTGAATTTTAGCTT 97741 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | |||||| | || || || || | |||| |||||| |||||||| | Sbjct 97740 TCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGTTTTCCCGGTCAGGG 97681 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || || ||||| Sbjct 97680 TCTTCACAAAGATTTGCAT 97662 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || ||||| |||| | || | | | || ||||| || || || Sbjct 98086 GTCGACTCTTTCTGGATGTTGTAGTCGCTAAGGGTTCGGCCA-TCTTCGAGTTGTTTTCC 98028 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 ||| | |||| ||||| ||||| || || |||||||||||||| ||| ||| || | Sbjct 98027 GGCGAAGATGAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC-TTGAATTTTAGCTT 97969 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | |||||| | || || || || | |||| |||||| |||||||| | Sbjct 97968 TCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGTTTTCCCGGTCAGGG 97909 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || || ||||| Sbjct 97908 TCTTCACAAAGATTTGCAT 97890 >seq10803 Length=2816097 Score = 96.9 bits (106), Expect = 3e-15 Identities = 186/272 (68%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 148237 TCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCA 148296 ||| ||| | || |||| ||||| || | ||| ||||| || | |||||||| | | Sbjct 2060754 TCAAGTCTTTGAGAAGATGATGATTGACAATCTGGAACTCTCCTGACAGCACGCGTCT-A 2060812 Query 148297 GA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTC 148355 || || | || || || | || |||| || ||||| ||||| | ||||| || || Sbjct 2060813 GAGTAGATATTACTAGTGTATGGCTCAATAGATTCGTTATTGCCAAGTATCTGAGCAGTG 2060872 Query 148356 GTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTG 148415 | |||||||||||| ||| | ||| || |||||| | || | | || | || Sbjct 2060873 GACGCCGTGGGCATGGGCGCAATCAGTAGACTGTTGCGGAGGCCATGTTCCTTGACCTTC 2060932 Query 148416 CGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGC 148475 |||||| ||| |||||||||| || || || || || ||||| | ||||||||| Sbjct 2060933 TTCTTCAGCGCCTCCCAGTCCCACAGGTTTGAGGGAGTGACATTCCAGAGATCGTACTGC 2060992 Query 148476 AGAATGCCGCGGCTAGCGGGGCTGCCCTCGTA 148507 | | || |||| ||||| ||||||||| Sbjct 2060993 AATAACCCTTGGCTGGCGGGAGAGCCCTCGTA 2061024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483355514020960