Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq10493 118 3e-21 seq10485 116 9e-21 seq10777 104 6e-17 >seq10493 Length=264610 Score = 118 bits (130), Expect = 3e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || |||||||| |||||||| || || ||| || Sbjct 49286 CAGATCTTTGTGAAGACTCTGACCGGAAAAACCATCACTTTAGAGGTCGAACCGAGCGAT 49345 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| || ||||| || |||||||| ||| ||| ||| ||| Sbjct 49346 ACGATCGAAAATGTGAAGGCGAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAACAA 49405 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||||||||||||||| ||||| | ||||| ||| | || || || |||||| || Sbjct 49406 AGACTTATCTTCGCCGGCAAGCAACTCGAAGACGGACGCACACTGAGTGACTACAACATC 49465 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || ||||| || ||| | | ||||| Sbjct 49466 CAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCG 49503 Score = 113 bits (124), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| ||||| ||||| || |||||||||||||| ||| |||| Sbjct 50198 CAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 50257 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||||| ||||| ||||| || || || ||| || Sbjct 50258 ACAATTGAGAATGTGAAAGC-CAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAGCA 50316 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | ||||||||||| ||||| | ||||| || | || || ||| |||||| | Sbjct 50317 AAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAACAT 50376 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| ||||| || ||||| || ||| | | ||||| Sbjct 50377 CCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCG 50415 Score = 109 bits (120), Expect = 1e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| ||||| || |||||||||||||| ||| |||| Sbjct 49514 CAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 49573 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||||| ||||| ||||| || || || ||| || Sbjct 49574 ACAATTGAGAATGTGAAAGC-CAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAGCA 49632 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | ||||||||||| ||||| | ||||| ||| | || || || |||||| | Sbjct 49633 AAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGACGCACACTGAGTGACTACAACAT 49692 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| ||||| || ||||| || ||| | | ||||| Sbjct 49693 CCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCG 49731 Score = 109 bits (120), Expect = 1e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| ||||| || |||||||||||||| ||| |||| Sbjct 49742 CAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 49801 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||||| ||||| ||||| || || || ||| || Sbjct 49802 ACAATTGAGAATGTGAAAGC-CAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAGCA 49860 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | ||||||||||| ||||| | ||||| || | || || ||| |||||| | Sbjct 49861 AAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAACAT 49920 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| ||||| || ||||| || ||| | | ||||| Sbjct 49921 CCAGAAGGAGTCCACACTTCATCTGGTTCTACGCCTTCG 49959 Score = 109 bits (120), Expect = 1e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| ||||| || |||||||||||||| ||| |||| Sbjct 49970 CAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 50029 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||||| ||||| ||||| || || || ||| || Sbjct 50030 ACAATTGAGAATGTGAAAGC-CAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAGCA 50088 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | ||||||||||| ||||| | ||||| || | || || ||| |||||| | Sbjct 50089 AAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAACAT 50148 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| ||||| || ||||| || ||| | | ||||| Sbjct 50149 CCAGAAGGAGTCCACACTTCATCTGGTTCTACGCCTTCG 50187 Score = 107 bits (118), Expect = 5e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| ||||| || |||||||||||||| ||| |||| Sbjct 50426 CAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 50485 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||||| ||||| ||||| || || || ||| || Sbjct 50486 ACAATTGAGAATGTGAAAGC-CAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAGCA 50544 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | ||||||||||| ||||| | ||||| || | || || ||| |||||| | Sbjct 50545 AAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAACAT 50604 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379 |||||| ||||| || ||||| || ||| Sbjct 50605 CCAGAAGGAGTCCACACTTCATCTGGTT 50632 Score = 104 bits (114), Expect = 6e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| ||||| ||||| || |||||||||||||| ||| |||| Sbjct 50654 CAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 50713 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||||| ||||| ||||| || || || ||| || Sbjct 50714 ACAATTGAGAATGTGAAAGC-CAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAACA 50772 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | ||||| ||||| ||||| | ||||| || | || || ||| |||||| | Sbjct 50773 GAGGTTGATCTTTGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAACAT 50832 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| ||||| || ||||| || ||| | | ||||| Sbjct 50833 CCAGAAGGAGTCCACACTTCATCTGGTTCTACGCCTTCG 50871 >seq10485 Length=261005 Score = 116 bits (128), Expect = 9e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || ||||| |||||| | ||||| ||| |||||| |||| Sbjct 97677 AAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAGCGACACAATCGAGAAT 97736 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| || ||||| ||| || ||| ||| |||| ||||| Sbjct 97737 GTGAAAGCTAAA-ATTCAAGACAAGGAAGGCATTCCCCCAGACCAACAACGACTCATCTT 97795 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||||||| ||| | |||||||| | || | ||| |||||| ||||||||||||| Sbjct 97796 CGCCGGAAAACAGCTAGAAGATGGCCGAACCCTTAGCGACTACAACATCCAGAAAGAGTC 97855 Query 206364 TACTCTTCACCTTGTT 206379 ||||||||| | ||| Sbjct 97856 GACTCTTCACTTGGTT 97871 Score = 98.7 bits (108), Expect = 2e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || ||||| |||||| | ||||| ||| |||||| |||| Sbjct 97905 AAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAGCGACACAATCGAGAAT 97964 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| || ||||| ||| || ||| || | | ||||| Sbjct 97965 GTGAAAGCTAAA-ATTCAAGACAAGGAAGGCATTCCCCCAGACCAACAGCGTTTCATCTT 98023 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||||||| || | |||||||| | || | ||| |||||| ||||||||||||| Sbjct 98024 CGCCGGAAAACAACTCGAAGATGGCCGAACCCTTAGCGACTACAACATCCAGAAAGAGTC 98083 Query 206364 TACTCTTCACCTTGTT 206379 ||||||||| | ||| Sbjct 98084 GACTCTTCACTTGGTT 98099 Score = 86.0 bits (94), Expect = 1e-11 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || || || ||||| | ||||| || | || || ||||| Sbjct 97449 AAAACACTCACTGGCAAGACTATCACCCTAGAAGTTGAGCCTAGCGATACGATCGAAAAT 97508 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| || ||||| ||| || ||| || | | || || Sbjct 97509 GTGAAAGCTAAA-ATTCAAGACAAGGAAGGCATTCCCCCAGACCAACAGCGTTTAATTTT 97567 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || || || | |||||||| | || || ||| |||||| ||||||||||||| Sbjct 97568 CGCTGGTAAACAACTCGAAGATGGCCGAACCCTGAGCGACTACAACATCCAGAAAGAGTC 97627 Query 206364 TACTCTTCACCTTGTT 206379 || |||||||| ||| Sbjct 97628 GACCCTTCACCTGGTT 97643 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/94 (82%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAG-TCCTTCCATCTT 204821 ||| | ||||||||| ||||||||||||| || ||||| || || | | | ||||||| Sbjct 97871 AACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTC-GCTAAGGGTTCGGCCATCTT 97813 Query 204822 CCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||||| |||||||||||||| || |||||||| Sbjct 97812 CTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTG 97779 >seq10777 Length=1546546 Score = 104 bits (114), Expect = 6e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| ||||| | ||||| || | |||||| |||| Sbjct 767481 AAAACACTCACTGGTAAAACTATCACCCTAGAAGTCGAGCCTAGTGACACGATCGAGAAT 767540 Query 206245 GTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||||| || ||| |||||||| || ||||| ||| || ||| || | | || || Sbjct 767541 GTAAAAGCGAAA-ATTCAAGACAAGGAAGGCATTCCCCCAGACCAACAGCGTTTAATTTT 767599 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||||||| ||| | |||||||| | || | ||| |||||| ||||||||||||| Sbjct 767600 CGCCGGAAAACAGCTTGAAGATGGCCGAACCCTAAGCGACTACAACATCCAGAAAGAGTC 767659 Query 206364 TACTCTTCACCTTGTT 206379 || |||||||| ||| Sbjct 767660 GACCCTTCACCTGGTT 767675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181657204978484