Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq2361 96.9 9e-16 >seq2361 Length=2839 Score = 96.9 bits (106), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 217 GCCATTCATGCCCACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCA 276 ||| | |||| | || | |||||| || |||||||| | |||||| | | ||| || Sbjct 1984 GCCCTGCATGTCGACGATGATTTCGGTGGTGTAGCGCTTAACGCCGTCTTTTTCC---CA 2040 Query 277 CTTGCGCGTTTGCAGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCT 336 || ||| || |||||| ||| || || | |||| |||||||||||||||| || Sbjct 2041 CTCGCGGGTCTGCAGCTTGCCCTCGATATATACCTGCGAACCTTTGCGCAGGTACTCGCC 2100 Query 337 GGCGATTTCTGCCAGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTT 396 || || || || | ||| ||||| | ||| |||||||| || ||||| || ||| Sbjct 2101 AGCAATCTCGGCAACCTTGCCGAACAGCGACACACGGTGCCACTCGGTTTTCTCGACCTT 2160 Query 397 CTCCCCTGTCTGCTTATCCTTCCA 420 || || |||||||| || |||| Sbjct 2161 CTGGCCAGTCTGCTTGTCGGTCCA 2184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135384228313224