Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq10485 96.9 3e-15 seq10777 89.7 5e-13 seq10798 84.2 2e-11 >seq10485 Length=261005 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| ||| || |||||| | || || || || ||||| || || Sbjct 97625 CTCTTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCGAGTTGTTTACCAGCGAA 97566 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT-CAGAG 35663 || || ||||| ||||| | |||| || |||||||| ||| ||| |||| || | Sbjct 97565 AATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCT-TGAATTTTAGCTTTCACAT 97507 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||| ||||| | || || || | ||||| || || || || | ||||||| Sbjct 97506 TTTCGATCGTATCGCTAGGCTCAACTTCTAGGGTGATAGTCTTGCCAGTGAGTGTTTTCA 97447 Query 35724 CAAATATCTGCATTCTG 35740 |||| || |||||| || Sbjct 97446 CAAAGATTTGCATTATG 97430 >seq10777 Length=1546546 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| ||| | |||||| | || || ||||| || || || || Sbjct 767657 CTCTTTCTGGATGTTGTAGTCGCTTAGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAA 767598 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAG 35663 || || ||||| ||||| | |||| || |||||||| ||| ||| |||| | | Sbjct 767597 AATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCT-TGAATTTTCGCTTTTACAT 767539 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | |||||| || | || || || | ||||| |||||||| || | ||||||| Sbjct 767538 TCTCGATCGTGTCACTAGGCTCGACTTCTAGGGTGATAGTTTTACCAGTGAGTGTTTTCA 767479 Query 35724 CAAATATCTGCAT 35736 |||| || ||||| Sbjct 767478 CAAAGATTTGCAT 767466 >seq10798 Length=2343873 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||||| |||||| |||| || ||| ||||| |||||||| ||| Sbjct 1324525 CCACCACGCAGCCTCAGCACCAAGTGTAGGGTTGACTCTTTTTGGATGTTGTAGTCGCTA 1324466 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || ||||||||||| ||||| || | || |||||||| | |||| Sbjct 1324465 AGGGTACGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCTGGAGGA 1324406 Query 35630 ACGC 35633 | || Sbjct 1324405 ATGC 1324402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450732720324320