Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq10485 141 9e-29 seq10777 120 3e-22 seq10493 120 3e-22 seq10803 87.8 2e-12 >seq10485 Length=261005 Score = 141 bits (156), Expect = 9e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 |||||||||||||| || | || | ||| || || || || || || |||||||||||| Sbjct 98119 TTTCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCG 98060 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | || ||| | || ||||| ||||| || || || || |||||||| || || || Sbjct 98059 CTAAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAGATGAAACGCTGTTGGTCTGGG 98000 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || |||||||| || ||||||||||| ||| || || | ||||||| | ||| Sbjct 97999 GGAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCA 97940 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || ||||| |||||||| ||||| | || || || || ||||||||| Sbjct 97939 ACTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCATT 97889 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||||||||| || | || | ||| || || || || || || ||||||||||||| Sbjct 97890 TTCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGC 97831 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||| | || || |||||||| || || || || | || || || || || | Sbjct 97830 TAAGGGTTCGGCCATCTTCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGG 97771 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || ||||||||||| ||| || || | ||||||| | ||| | Sbjct 97770 GAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAA 97711 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || ||||| |||||||| ||||| | || || || || ||||||||| Sbjct 97710 CTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCATT 97661 Score = 118 bits (130), Expect = 1e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||||||||| || | || ||||| || || || || || || ||||||||||||| Sbjct 97662 TTCCTCCTCTGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGC 97603 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | || ||||| ||||| || || ||||| |||||||| || || || | Sbjct 97602 TCAGGGTTCGGCCATCTTCGAGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTCTGGGG 97543 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || ||||||||||| ||| || || | || ||| | || | Sbjct 97542 GAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTTTCGATCGTATCGCTAGGCTCAA 97483 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 | || || || || || || || || | ||||| || || ||||||||| || Sbjct 97482 CTTCTAGGGTGATAGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCATTATG 97430 >seq10777 Length=1546546 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||||| ||| || | || ||||| || || || || || || ||||||||||||| Sbjct 767694 TTCCTCCTCGGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGC 767635 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | || || |||||||| || || ||||| |||||||| || || || | Sbjct 767634 TTAGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTCTGGGG 767575 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || ||||||||||| ||| || || | ||||| | || | Sbjct 767574 GAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTCTCGATCGTGTCACTAGGCTCGA 767515 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || || |||||||| || | ||||| || || |||||||| Sbjct 767514 CTTCTAGGGTGATAGTTTTACCAGTGAGTGTTTTCACAAAGATTTGCAT 767466 >seq10493 Length=264610 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 |||||||| | || || | || || || || ||||| ||||| || |||||||||||| Sbjct 50880 TTTCCTCCACGAAGGCGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCG 50821 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | | ||| || ||| || || || ||||| ||||| ||||| | ||| || || || Sbjct 50820 CTCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCAAAGATCAACCTCTGTTGGTCTGGT 50761 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || ||||| ||||| || || ||| || || | |||||| | ||| Sbjct 50760 GGGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCA 50701 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || | ||| ||||| || || || | |||||| |||||||| |||||| Sbjct 50700 ACTTCCAAAGTGATGGTCTTTCCAGTGAGAGTTTTGACGAAAATCTGCATT 50650 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||||||||| || || | || || || || ||||| ||||| || ||||||||||||| Sbjct 50651 TTCCTCCTCTCAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGC 50592 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| || ||| || || || ||||| || || ||||| | ||||| || || | Sbjct 50591 TCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTG 50532 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || ||||| ||||| || || ||| || || | |||||| | ||| | Sbjct 50531 GGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAA 50472 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | ||| ||||| || || || | ||| || |||||||| |||||| Sbjct 50471 CTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 50422 Score = 114 bits (126), Expect = 1e-20 Identities = 176/250 (70%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | || || || || ||||| ||||| || ||||||||||| | Sbjct 49511 TTCCTCCACGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAC 49452 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | ||| ||||| || ||||| || || || | | || || ||||||| Sbjct 49451 TCAGTGTGCGTCCGTCTTCGAGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGCG 49392 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||||||||| || |||||||| || || || | || ||| || ||| | Sbjct 49391 GAATGCCTTCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTATCGCTCGGTTCGA 49332 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGT 134724 | || | ||| |||||||| ||||| | ||| || || || || ||||| ||| |||| Sbjct 49331 CCTCTAAAGTGATGGTTTTTCCGGTCAGAGTCTTCACAAAGATCTGCATGTTGAGTTTGG 49272 Query 134725 TCAACGTTTA 134734 | || ||||| Sbjct 49271 TGAA-GTTTA 49263 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | || || || || ||||| ||||| || ||||||||||||| Sbjct 50423 TTCCTCCACGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGC 50364 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| || ||| || || || ||||| || || ||||| | ||||| || || | Sbjct 50363 TCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTG 50304 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || ||||| ||||| || || ||| || || | |||||| | ||| | Sbjct 50303 GGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAA 50244 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | ||| ||||| || || || | |||||| |||||||| |||||| Sbjct 50243 CTTCCAAAGTGATGGTCTTTCCAGTGAGAGTTTTGACGAAAATCTGCATT 50194 Score = 109 bits (120), Expect = 6e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | || || || || ||||| ||||| || ||||||||||||| Sbjct 49967 TTCCTCCACGAAGGCGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGC 49908 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| || ||| || || || ||||| || || ||||| | ||||| || || | Sbjct 49907 TCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTG 49848 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || ||||| ||||| || || ||| || || | |||||| | ||| | Sbjct 49847 GGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAA 49788 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | ||| ||||| || || || | ||| || |||||||| |||||| Sbjct 49787 CTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49738 Score = 109 bits (120), Expect = 6e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | || || || || ||||| ||||| || ||||||||||||| Sbjct 50195 TTCCTCCACGAAGGCGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGC 50136 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| || ||| || || || ||||| || || ||||| | ||||| || || | Sbjct 50135 TCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTG 50076 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || ||||| ||||| || || ||| || || | |||||| | ||| | Sbjct 50075 GGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAA 50016 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | ||| ||||| || || || | ||| || |||||||| |||||| Sbjct 50015 CTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49966 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | || || || || ||||| ||||| || ||||||||||| | Sbjct 49739 TTCCTCCACGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAC 49680 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | ||| || || || ||||| || || ||||| | ||||| || || | Sbjct 49679 TCAGTGTGCGTCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTG 49620 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || ||||| ||||| || || ||| || || | |||||| | ||| | Sbjct 49619 GGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAA 49560 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | ||| ||||| || || || | ||| || |||||||| |||||| Sbjct 49559 CTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49510 >seq10803 Length=2816097 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 9086 ACATTAAAGAGCTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATCGGCATGG 9145 || |||||| |||| || || || ||||| || ||||| || |||| | ||||| Sbjct 2059898 ACCTTAAAGCTTTGTACAAGACAGTCTGGGAGATTAAGCAGCGCGTCTTGATTGACATGG 2059839 Query 9146 CTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCAC 9205 | || || ||||| |||||||| || ||||| || ||||||||||||||| | ||| || Sbjct 2059838 CCGCAGACAGAGGTGCTTTTATCGACCAGAGCCAGTCTTTTAACGTGTTCATCGCCCAAC 2059779 Query 9206 CAACTT 9211 | |||| Sbjct 2059778 CTACTT 2059773 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||||| |||| ||| ||||| || ||||| ||||||||||| || || | Sbjct 2064455 CAGCACATGCTAATGCGAGTGAGTGTGGGAATCCACGGTGAAGACATTGATGCTGCTATT 2064396 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || || ||| | |||||||| || ||| || || || || || ||| ||||| | Sbjct 2064395 GAGACTTACAACCTGATGTCTGAAAAGTGGTTCACCCATGCATCACCAACCCTGTTTAAC 2064336 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || ||||||||| || ||| ||||| || ||| | || || ||| || || || Sbjct 2064335 GCAGGCACAAACCGACCACAAATGTCCAGTTGCTTTCTTCTTACAATGTCTGATGATAGT 2064276 Query 7744 ATCGACGGCATTTA 7757 || || || || || Sbjct 2064275 ATTGAAGGAATCTA 2064262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505330145946080