Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq9558 127 1e-24 >seq9558 Length=35122 Score = 127 bits (140), Expect = 1e-24 Identities = 188/260 (72%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 21555 CAATGTGAACTGGCTACAGCAAAAGGGCTGCCACATCTGGGACGAATGGGCTGGTCCTGA 21614 ||| ||| |||||| ||| | |||||| ||||||| |||||||||| | || Sbjct 51 CAACGTGCGCTGGCTGCAGGAGCGCGGCTGCACCATCTGGAACGAATGGGCACGCGAGGA 110 Query 21615 TGGCGGCCTCGGCCCGATCTATGGTGCCCAGTGGCGCAGCAT-CCAAGGCCCCGATGGAA 21673 |||| ||| |||||| |||| || | || ||||||| | || | ||| || || Sbjct 111 CGGCGACCTGGGCCCGGTCTACGGCGTGCAATGGCGCAACTGGCCCACGCCG-GACGGCG 169 Query 21674 AGAACATCGACCAGCTGGCC-AAG-GCACAAGAGCTGCTGCTGAACGACCCGGACAGCCG 21731 ||||||||||| | ||| ||| | || ||| ||| || | ||||||||||||| Sbjct 170 GCCACATCGACCAGATCGCCGAAGTGGTCA--AGCAGCTCAAGAGCAACCCGGACAGCCG 227 Query 21732 CCGCATCATCGTGAATGCCTGGAACGTGGCCGAGCTCGACCAGATGGCCCTGACACCGTG 21791 |||||||||||| | ||||||||||||||||| || |||||||| || | || || Sbjct 228 CCGCATCATCGTCAGCGCCTGGAACGTGGCCGACCTGCCGCAGATGGCGCTCATGCCCTG 287 Query 21792 CCATGCGATGTTCCAGTTCT 21811 ||| || | |||||||||| Sbjct 288 CCACGCCTTCTTCCAGTTCT 307 Score = 116 bits (128), Expect = 2e-21 Identities = 140/188 (74%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 21949 CTGAGCTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATC 22008 || || ||| | || || ||||||||||| ||||| ||||||||||| |||||||||||| Sbjct 325 CTCAGTTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTTCCCTTCAACATC 384 Query 22009 GCCAGCTACGCGCTGCTGACGCACCTCATGG--CGGCCACGGTCGGCATGCAGGCCGAGA 22066 ||||||||||| ||||||| ||| | ||| | || | | || | |||||| | Sbjct 385 GCCAGCTACGCATTGCTGACCCACATGCTGGCCCAGCAATG--CGACCTGCAGGTGGGTG 442 Query 22067 AGTTCATCTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGGCCAAG- 22125 | ||| ||||| | ||||| ||||||||| | ||| ||||| | | ||||| | || Sbjct 443 ACTTCGTCTGGACCGGCGGCGACTGCCACATCTACAACAACCATTTCGCCCAGGTCGAGA 502 Query 22126 --CAGCTG 22131 |||||| Sbjct 503 CCCAGCTG 510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236612040302444