Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq9558 102 1e-16 >seq9558 Length=35122 Score = 102 bits (112), Expect = 1e-16 Identities = 190/279 (68%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 198335 TGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATCGCGTCT 198394 || ||||| || || ||||| ||||| | ||||| ||||| || ||||||||||| Sbjct 331 TGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTTCCCTTCAACATCGCCAGC 390 Query 198395 TACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGATTTCATT 198454 |||||||| || |||||| | |||||||| || || | ||| || ||| | Sbjct 391 TACGCATTGCTGACCCACATGCTGGCCCAGCAATGCGACCTGCAGGTGGGTGACTTCGTC 450 Query 198455 TGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCTCCAGCTG 198514 ||||| ||||| ||| || ||||| || ||| | | |||| | || ||||||| Sbjct 451 TGGACCGGCGGCGACTGCCACATCTACAACAACCATTTCGCCCAGGTCGAGACCCAGCTG 510 Query 198515 ACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCGTAAACCGGAATCTATCTTC 198574 |||| |||| || | | |||| ||| |||||||| || || || |||||| Sbjct 511 GCGCGCCAGCCCTTCGCCTACCCGACGCTGCAGATCAAGCGCCGGCCCGACTCCATCTTC 570 Query 198575 GATTATAAATTCGAAGATTTTGAGATCGTTGGGTATCAG 198613 | || | | ||| || || ||| |||| || || ||| Sbjct 571 GGCTACGAGTACGAGGACTTCGAGGTCGTCGGCTACCAG 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769089720404320