Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq2361 105 2e-18 >seq2361 Length=2839 Score = 105 bits (116), Expect = 2e-18 Identities = 186/268 (69%), Gaps = 5/268 (2%) Strand=Plus/Minus Query 41205 GATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATCGCCACA 41264 || || |||| || ||| ||||||||||| |||||| | || || ||| | || || Sbjct 2253 GACCCGGAAACTCGCTACCTGCCAAGCGGCAACGCGGTCACCAACCTGAGCCTGGCGACC 2194 Query 41265 ACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGGCACCGC 41324 | || |||| || || || ||| ||||| || |||| || |||||||| Sbjct 2193 AGCGAGCAGTGGACCGACAAGCAGACTGGCCAGAAGGTCGAGAAAACCGAGTGGCACCGT 2134 Query 41325 GTTGTCA-TCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTGCGCAAAGGTAGCAA 41383 || ||| | ||||| ||| | || || |||||| |||| ||||||||||||||| | Sbjct 2133 GT-GTCGCTGTTCGGCAAGGTTGCCGAGATTGCTGGCGAGTACCTGCGCAAAGGTTCGCA 2075 Query 41384 GGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGACCAGGCTGGCGTTGATCG 41443 ||| | || || |||| |||| || || | || ||| | | |||||| | || Sbjct 2074 GGTATATATCGAGGGCAAGCTGCAGACCCGCGAGTG---GGAAAAAGACGGCGTTAAGCG 2018 Query 41444 CTACACCACTGAAATCAACGTGGGCATG 41471 ||||||||| ||||||| ||| | |||| Sbjct 2017 CTACACCACCGAAATCATCGTCGACATG 1990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133192509541344