Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq10803 96.9 4e-15 >seq10803 Length=2816097 Score = 96.9 bits (106), Expect = 4e-15 Identities = 170/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895 ||||| || ||||| || || || | ||||| | | |||||||||||||| || Sbjct 2064211 CCAATTCCTCCAGCATTTTTAGAAATAAGTGCACAAGTCCTTAGAGTTCCATAGATTCCT 2064270 Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955 | || || || | | | ||| |||||||||||||| || |||| ||| Sbjct 2064271 TCAATACTATCATCAGACATTGTAAGAAGAAAGCAACTGGACATTTGTGGTCGGTTTGTG 2064330 Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTAT 112015 || || || || |||||||||| ||| || ||||| || |||||| || ||| Sbjct 2064331 CCTGCGTTAAACAGGGTTGGTGATGCATGGGTGAACCACTTTTCAGACATCAGGTTGTAA 2064390 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 ||||| | ||| |||||||||||| |||||||| || | || ||||| | |||| Sbjct 2064391 GTCTCAATAGCAGCATCAATGTCTTCACCGTGGATTCCCACACTCACTCGCATTAGCATG 2064450 Query 112076 TACTGTGG 112083 | |||||| Sbjct 2064451 TGCTGTGG 2064458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627947184278400