Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq10803 89.7 6e-13 >seq10803 Length=2816097 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 118103 CCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACC 118162 ||| ||||| |||| | | | || | | ||||| | |||||||| ||||| || Sbjct 2060737 CCACAGACCCATCTCTGTCAAGTCTTTGAGAAGATGATGATTGACAATCTGGAACTCTCC 2060796 Query 118163 CGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 118221 | || |||||| ||| |||||||| | ||||||||||||| | || || || | Sbjct 2060797 TGACAGCACGCGTCT-AGAGTAGATATTACTAGTGTATGGCTCAATAGATTCGTTATTGC 2060855 Query 118222 CCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 118281 | | || || || ||||| || ||||||||||| || || || || ||||| ||||| | Sbjct 2060856 CAAGTATCTGAGCAGTGGACGCCGTGGGCATGGGCGCAATCAGTAGACTGTTGCGGAGGC 2060915 Query 118282 CCTTTTCCCTAATGCGTTC--CTTGAGAGCGTCCCAGTC 118318 | | |||| | | | ||| ||| || || |||||||| Sbjct 2060916 CATGTTCCTTGA--CCTTCTTCTTCAGCGCCTCCCAGTC 2060952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618351680326240