Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq10803 96.9 4e-15 >seq10803 Length=2816097 Score = 96.9 bits (106), Expect = 4e-15 Identities = 170/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| | ||||| ||| | || || || || |||||||||||| ||| Sbjct 2064458 CCACAGCACATGCTAATGCGAGTGAGTGTGGGAATCCACGGTGAAGACATTGATGCTGCT 2064399 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| || |||||| || ||||| || ||| |||||||||| || Sbjct 2064398 ATTGAGACTTACAACCTGATGTCTGAAAAGTGGTTCACCCATGCATCACCAACCCTGTTT 2064339 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || || || ||| |||| ||||||||||||||||| ||| | | | || || Sbjct 2064338 AACGCAGGCACAAACCGACCACAAATGTCCAGTTGCTTTCTTCTTACAATGTCTGATGAT 2064279 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || | || |||||||||||||| | | ||||| | || || || ||||| Sbjct 2064278 AGTATTGAAGGAATCTATGGAACTCTAAGGACTTGTGCACTTATTTCTAAAAATGCTGGA 2064219 Query 104462 GGTATTGG 104469 || ||||| Sbjct 2064218 GGAATTGG 2064211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583182030628960