Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq8589 104 3e-17 >seq8589 Length=14632 Score = 104 bits (114), Expect = 3e-17 Identities = 205/302 (68%), Gaps = 5/302 (2%) Strand=Plus/Minus Query 59834 CGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCT 59893 ||| || || || || |||| |||| | || || ||| || |||||| | | | Sbjct 6091 CGAAACCTATTCTCTTTTGATTGATACTTATGTGAAAGATGAGGTAGAGAAAGATAAATT 6032 Query 59894 GTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTG 59953 |||| ||| || || || || ||| | ||| ||||||||||||||| | | || Sbjct 6031 ATTCCATGCTATTGAAGTGTTTCCAGCAATAAAAAGAAAAGCAGAATGGGCATTAAAATG 5972 Query 59954 GAT-GAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAA 60012 ||| ||||| | || ||||| || | || || || |||||| |||||||||| Sbjct 5971 GATTGAGTCT----GATTCTTTTGCTGAAAGACTTATCGCATTTGCAGCTGTGGAAGGAA 5916 Query 60013 TCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGG 60072 | |||||||| || |||| ||| ||||||| ||| | || || | || | ||||| | Sbjct 5915 TATTCTTCTCAGGAGCGTTTTGTTCTATTTTTTGGTTAAAGAAAAGAGGGTTAATGCCTG 5856 Query 60073 GCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAG 60132 | | | || || |||||| | ||||| || || || || | ||| || ||||||| Sbjct 5855 GTTTAACATTTTCTAACGAGTTAATTTCTCGTGATGAAGGAGTGCATTGTGATTTTGCAG 5796 Query 60133 TG 60134 || Sbjct 5795 TG 5794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548450721725760