Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq10485 187 3e-42 seq10493 150 2e-31 seq10777 141 1e-28 seq10798 98.7 1e-15 >seq10485 Length=261005 Score = 187 bits (206), Expect = 3e-42 Identities = 176/222 (79%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 ||||||||||||||||| || || || || ||||||||||| || || || |||||| | Sbjct 97431 ATAATGCAAATCTTTGTGAAAACACTCACTGGCAAGACTATCACCCTAGAAGTTGAGCCT 97490 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| || | |||| |||| ||||||||||| |||||||| || ||||| |||||| Sbjct 97491 AGCGATACGATCGAAAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGAC 97550 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTA 27581 || |||||| ||||||| |||||||| |||||||| |||| || ||||| ||| ||||| Sbjct 97551 CAACAGCGTTTAATTTTCGCTGGTAAACAACTCGAAGATGGCCGAACCCTGAGC-GACTA 97609 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 || |||| || || || || ||||| || || | ||||| Sbjct 97610 CAACATCCAGAAAGAGTCGACCCTTCACCTGGTTCTACGTCT 97651 Score = 156 bits (172), Expect = 5e-33 Identities = 159/205 (78%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| ||||| || ||||| || || || ||||| || ||||| || | Sbjct 97889 AATGCAAATCTTTGTGAAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAG 97948 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | ||| |||| ||||||||||| |||||||| || ||||| |||||||| Sbjct 97949 CGACACAATCGAGAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 98008 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC-TAGCAGACTATA 27583 |||||| | || || || || || |||||||| |||| || |||| |||| ||||| | Sbjct 98009 ACAGCGTTTCATCTTCGCCGGAAAACAACTCGAAGATGGCCGAACCCTTAGC-GACTACA 98067 Query 27584 ATGTCCAAAAGGAATCCACTCTTCA 27608 | |||| || || || |||||||| Sbjct 98068 ACATCCAGAAAGAGTCGACTCTTCA 98092 Score = 141 bits (156), Expect = 1e-28 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| ||||| || ||||| || || || ||||| || ||||| || | Sbjct 97661 AATGCAAATCTTTGTGAAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAG 97720 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | ||| |||| ||||||||||| |||||||| || ||||| |||||||| Sbjct 97721 CGACACAATCGAGAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 97780 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC-TAGCAGACTATA 27583 || || || || || || || || || || || |||| || |||| |||| ||||| | Sbjct 97781 ACAACGACTCATCTTCGCCGGAAAACAGCTAGAAGATGGCCGAACCCTTAGC-GACTACA 97839 Query 27584 ATGTCCAAAAGGAATCCACTCTTCA 27608 | |||| || || || |||||||| Sbjct 97840 ACATCCAGAAAGAGTCGACTCTTCA 97864 >seq10493 Length=264610 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || ||||| || || || ||| | ||||| || | | Sbjct 49283 ATGCAGATCTTTGTGAAGACTCTGACCGGAAAAACCATCACTTTAGAGGTCGAACCGAGC 49342 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| ||||||| |||||||||||||| || || ||||| || ||||| Sbjct 49343 GATACGATCGAAAATGTGAAGGCGAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 49402 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || || || || ||||||||||| || | || || || ||||| || Sbjct 49403 CAAAGACTTATCTTCGCCGGCAAGCAACTCGAAGACGGACGCACACTGAGTGACTACAAC 49462 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| ||||| |||||||| || | |||||||| || ||| Sbjct 49463 ATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCGTGGAGGA 49510 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| || || || ||||| || ||| | || ||||| || | Sbjct 49738 AATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 49797 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| ||| |||| || || || || ||||| ||||| || || |||||||| Sbjct 49798 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 49857 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 ||| | | || || || || |||||||| || || | ||| || || ||| ||||| | Sbjct 49858 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGC-GACTACA 49916 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| ||||| |||||||| || | || ||||| || ||| Sbjct 49917 ACATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGCCTTCGTGGAGGA 49966 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| || || || ||||| || ||| | || ||||| || | Sbjct 49966 AATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 50025 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| ||| |||| || || || || ||||| ||||| || || |||||||| Sbjct 50026 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 50085 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 ||| | | || || || || |||||||| || || | ||| || || ||| ||||| | Sbjct 50086 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGC-GACTACA 50144 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| ||||| |||||||| || | || ||||| || ||| Sbjct 50145 ACATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGCCTTCGTGGAGGA 50194 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || ||||| || || || || ||||| || ||| | || ||||| || | Sbjct 50194 AATGCAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 50253 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| ||| |||| || || || || ||||| ||||| || || |||||||| Sbjct 50254 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 50313 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 ||| | | || || || || |||||||| || || | ||| || || ||| ||||| | Sbjct 50314 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGC-GACTACA 50372 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| ||||| |||||||| || | |||||||| || ||| Sbjct 50373 ACATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCGTGGAGGA 50422 Score = 134 bits (148), Expect = 2e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| || || || ||||| || ||| | || ||||| || | Sbjct 49510 AATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 49569 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| ||| |||| || || || || ||||| ||||| || || |||||||| Sbjct 49570 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 49629 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | || || || || |||||||| || || | || || || ||||| || Sbjct 49630 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGACGCACACTGAGTGACTACAA 49689 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| ||||| |||||||| || | |||||||| || ||| Sbjct 49690 CATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCGTGGAGGA 49738 Score = 132 bits (146), Expect = 5e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| || || || ||||| || ||| | || ||||| || | Sbjct 50422 AATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 50481 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| ||| |||| || || || || ||||| ||||| || || |||||||| Sbjct 50482 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 50541 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 ||| | | || || || || |||||||| || || | ||| || || ||| ||||| | Sbjct 50542 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGC-GACTACA 50600 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | |||| ||||| ||||| |||||||| || | ||||| Sbjct 50601 ACATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCT 50640 >seq10777 Length=1546546 Score = 141 bits (156), Expect = 1e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || |||||||||||||| || || || || || || ||||| || || || || ||| | Sbjct 767463 ATCATGCAAATCTTTGTGAAAACACTCACTGGTAAAACTATCACCCTAGAAGTCGAGCCT 767522 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||| | || | ||| | || || |||||||| |||||||| || ||||| |||||| Sbjct 767523 AGTGACACGATCGAGAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCCCCAGAC 767582 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || |||||| ||||||| || || || || || || |||| || |||||| ||||| Sbjct 767583 CAACAGCGTTTAATTTTCGCCGGAAAACAGCTTGAAGATGGCCGAACCCTAAGCGACTAC 767642 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || |||| || || || || ||||| || || | ||||| || || ||| Sbjct 767643 AACATCCAGAAAGAGTCGACCCTTCACCTGGTTCTACGTCTCCGAGGAGGA 767693 >seq10798 Length=2343873 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/126 (79%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || ||||||||||||||||| ||||| || |||||||||||||| || || |||| |||| Sbjct 1324401 GGCATTCCTCCAGACCAGCAACGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGTCGT 1324460 Query 27568 ACCC-TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCG 27626 |||| |||| ||||| || ||||||| || || || || || | || || | || || Sbjct 1324461 ACCCTTAGC-GACTACAACATCCAAAAAGAGTCAACCCTACACTTGGTGCTGAGGCTGCG 1324519 Query 27627 CGGTGG 27632 ||||| Sbjct 1324520 TGGTGG 1324525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570233379580480