Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq9558 89.7 4e-13 >seq9558 Length=35122 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 29954 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 30013 || |||| ||||| || || | | ||||||||||||||| ||||| || || || Sbjct 419 TGGGCCAGCATGTGGGTCAGCAATGCGTAGCTGGCGATGTTGAAGGGAACGCCCAGGAAG 360 Query 30014 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGA 30073 |||||| | | |||||| ||||| || ||||| |||||| ||| || ||||| Sbjct 359 ATGTCCGCGCTGCGCTGGTACAGCTGGCAACTGAGCTTGCCGTCGGCCACATAGAACTGG 300 Query 30074 CACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCAC 30133 | | ||||||||| || || ||||| | || ||| ||||||||||| Sbjct 299 AAGAAGGCGTGGCAGGGCATGAGCGCCATCTGCGGCAGGTCGGCCACGTTCCAGGCGCTG 240 Query 30134 ACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA 30167 ||||||||||| | | || |||||| || ||| Sbjct 239 ACGATGATGCGGCGGCTGTCCGGGTTGCTCTTGA 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406256899585968