Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq10485 147 2e-30 seq10777 145 7e-30 seq10493 123 2e-23 >seq10485 Length=261005 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || |||||||| || | || ||||| ||||| ||||| | Sbjct 97890 ATGCAAATCTTTGTGAAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAGC 97949 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || ||| |||||||||||||| |||||||| || || || ||| Sbjct 97950 GACACAATCGAGAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAA 98009 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | |||||| |||||| | ||||| | ||| || ||| |||||| Sbjct 98010 CAGCGTTTCATCTTCGCCGGAAAACAACTCGAAGATGGCCGAACCCTTAGCGACTACAAC 98069 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 || || || |||||||| | || |||||| | ||| Sbjct 98070 ATCCAGAAAGAGTCGACTCTTCACTTGGTTCTACGT 98105 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || |||||| |||| || || ||||| || || | Sbjct 97434 ATGCAAATCTTTGTGAAAACACTCACTGGCAAGACTATCACCCTAGAAGTTGAGCCTAGC 97493 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || ||| |||||||||||||| |||||||| || || || ||| Sbjct 97494 GATACGATCGAAAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAA 97553 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||||||||| | ||| || |||||| | ||||| | ||| | ||| |||||| Sbjct 97554 CAGCGTTTAATTTTCGCTGGTAAACAACTCGAAGATGGCCGAACCCTGAGCGACTACAAC 97613 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 || || || ||||||||| | || ||||| | ||| Sbjct 97614 ATCCAGAAAGAGTCGACCCTTCACCTGGTTCTACGT 97649 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || |||||||| || | || ||||| ||||| ||||| | Sbjct 97662 ATGCAAATCTTTGTGAAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAGC 97721 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || ||| |||||||||||||| |||||||| || || || ||| Sbjct 97722 GACACAATCGAGAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAA 97781 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | |||||| ||||| | ||||| | ||| || ||| |||||| Sbjct 97782 CAACGACTCATCTTCGCCGGAAAACAGCTAGAAGATGGCCGAACCCTTAGCGACTACAAC 97841 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 || || || |||||||| | || |||||| | ||| Sbjct 97842 ATCCAGAAAGAGTCGACTCTTCACTTGGTTCTACGT 97877 >seq10777 Length=1546546 Score = 145 bits (160), Expect = 7e-30 Identities = 181/248 (73%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 26970 ttttttAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACT 27029 ||||||| ||| | | |||||| || ||||| ||||| || || || || |||| || Sbjct 767448 TTTTTTATTTTTTTCATCATGCAAATCTTTGTGAAAACACTCACTGGTAAAACTATCACC 767507 Query 27030 CTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAA 27089 || ||||| || || ||| |||| |||| || ||| |||||||||||||| ||| Sbjct 767508 CTAGAAGTCGAGCCTAGTGACACGATCGAGAATGTAAAAGCGAAAATTCAAGACAAGGAA 767567 Query 27090 GGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCG 27149 ||||| || || || |||||||||||||| | |||||| ||||| | ||||| | Sbjct 767568 GGCATTCCCCCAGACCAACAGCGTTTAATTTTCGCCGGAAAACAGCTTGAAGATGGCCGA 767627 Query 27150 ACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGG 27209 ||| | ||| |||||||| || || ||||||||| | || ||||| | ||| | || Sbjct 767628 ACCCTAAGCGACTACAACATCCAGAAAGAGTCGACCCTTCACCTGGTTCTACGTCTCCGA 767687 Query 27210 GGTGGCAT 27217 || || || Sbjct 767688 GGAGGAAT 767695 >seq10493 Length=264610 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || ||||||||||| || | || ||| | || || |||||| Sbjct 49282 CATGCAGATCTTTGTGAAGACTCTGACCGGAAAAACCATCACTTTAGAGGTCGAACCGAG 49341 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| |||| || | || || |||||||| |||||||||||||| || ||||| || Sbjct 49342 CGATACGATCGAAAATGTGAAGGCGAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCA 49401 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||||||||| ||| | |||||| | || | || ||||| Sbjct 49402 ACAAAGACTTATCTTCGCCGGCAAGCAACTCGAAGACGGACGCACACTGAGTGACTACAA 49461 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || | ||| ||||| | ||| | || || || || Sbjct 49462 CATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCGTGGAGGAAT 49512 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||||| || || ||| | || ||| | ||||| ||||| Sbjct 50195 ATGCAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 50254 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || ||| || || ||||||||||| || || ||||| || || Sbjct 50255 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 50314 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||||||||| ||| | |||||| || || | ||| |||||| Sbjct 50315 CAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAAC 50374 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | ||| ||||| | ||| | || || || || Sbjct 50375 ATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCGTGGAGGAAT 50424 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||||| || || ||| | || ||| | ||||| ||||| Sbjct 50651 ATGCAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 50710 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || ||| || || ||||||||||| || || ||||| || ||| Sbjct 50711 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAA 50770 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||||| ||| | |||||| || || | ||| |||||| Sbjct 50771 CAGAGGTTGATCTTTGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAAC 50830 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || |||||||| || | ||| ||||| Sbjct 50831 ATCCAGAAGGAGTCCACACTTCATCTGGTT 50860 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| | || ||| | ||||| ||||| Sbjct 50423 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 50482 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || ||| || || ||||||||||| || || ||||| || || Sbjct 50483 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 50542 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||||||||| ||| | |||||| || || | ||| |||||| Sbjct 50543 CAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAAC 50602 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | ||| ||||| | ||| || | || || || Sbjct 50603 ATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTGAGAGGAGGAAT 50652 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| | || ||| | ||||| ||||| Sbjct 49739 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 49798 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || ||| || || ||||||||||| || || ||||| || || Sbjct 49799 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 49858 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||||||||| ||| | |||||| || || | ||| |||||| Sbjct 49859 CAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAAC 49918 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || |||||||| || | ||| ||||| Sbjct 49919 ATCCAGAAGGAGTCCACACTTCATCTGGTT 49948 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| | || ||| | ||||| ||||| Sbjct 49967 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 50026 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || ||| || || ||||||||||| || || ||||| || || Sbjct 50027 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 50086 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||||||||| ||| | |||||| || || | ||| |||||| Sbjct 50087 CAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAAC 50146 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || |||||||| || | ||| ||||| Sbjct 50147 ATCCAGAAGGAGTCCACACTTCATCTGGTT 50176 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| | || ||| | ||||| ||||| Sbjct 49511 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGT 49570 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || ||| || || ||||||||||| || || ||||| || || Sbjct 49571 GACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 49630 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||||||||| ||| | |||||| | || | || |||||| Sbjct 49631 CAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGACGCACACTGAGTGACTACAAC 49690 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | ||| ||||| | ||| | || || || || Sbjct 49691 ATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTTCGTGGAGGAAT 49740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434859664270080