Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq3329 136 2e-27 >seq3329 Length=3274 Score = 136 bits (150), Expect = 2e-27 Identities = 332/496 (67%), Gaps = 13/496 (3%) Strand=Plus/Minus Query 66776 GTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGT 66835 |||||||||||||| || || ||| || ||| |||||||||| || || ||| | Sbjct 996 GTTGACTCCGTGGCAGCACTAACGCCCAAAGCTGAGATCGAAGGCGAAATGGGTGACTCT 937 Query 66836 CACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACTGGCACCAT- 66894 || ||||||||||| ||||| | ||||||||||| |||| || ||||| || | | | Sbjct 936 CATGTCGGCCTGCAAGCGCGTTTGATGTCACAGGCGCTGCGTAAACTCACCGGTAACGTA 877 Query 66895 CTCCAGCACCAACACGCTGAC-GCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACG 66953 ||| | ||| ||| || | | |||||||| | || ||| || || | Sbjct 876 AAACAG-TCGAAC-TGCTTACTAGTATTCATCAACCAGATTCGTATGAAAATTGG---TG 822 Query 66954 TGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAG 67013 || | ||| ||| || || || ||||| || || ||| |||||||| || | Sbjct 821 TGATGTTTGGCAGCCCTGAAACGACGACTGGCGGTAACGCACTGAAATTCTACGCGTCTG 762 Query 67014 TCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACC 67073 | ||| ||||| | ||||| |||| | | | |||| | || ||||||| || || ||| Sbjct 761 TTCGTCTGGATATTCGTCGTATCGGCTCTGTGAAGCAGGGTGATGAGGTGGTGGGTAACG 702 Query 67074 GCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAATGCCGAGTTCT 67133 ||||| ||||| || || || ||||| | | |||||| | | | ||||||||| Sbjct 701 AAACCCGCGTGAAAGTGGTGAAAAACAAAGTATCACCGCCGTTCAGACAAGCCGAGTTCC 642 Query 67134 CCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGC 67193 | |||| || ||||||||| || || |||| || | ||| ||| ||| | Sbjct 641 AGATTCTGTATGGTCAGGGCATCTACCGAATGGGCGAAGTCATTGACTTGGGCGTTCAGA 582 Query 67194 AGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGT---ACGGGGACAAGAACGTCGCCC 67250 | || | ||| | ||||| || || |||| | || |||| || || | ||| || Sbjct 581 ACGGTTTAGTGGATAAGTCTGGTGCTTGGTACGCGTATAACGGCGATAAAA---TCGGCC 525 Query 67251 AGGGCAAGCCCAAGGC 67266 |||| ||| | || || Sbjct 524 AGGGTAAGGCGAATGC 509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242828821607736