Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq10485 86.0 5e-12 >seq10485 Length=261005 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||| | || || ||||| || || ||||| ||| || ||| | |||||| Sbjct 97642 ACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCG 97583 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 | |||||| || || | || | | ||||||||| ||| | |||||| ||||| | Sbjct 97582 AGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGA 97523 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 ||||| |||||||| | | ||| || | | | ||| | ||| ||||| ||| Sbjct 97522 ATTTTAGCTTTCACATTTTCGATCGTATCGCTAGGCTCAACTTCTAGGGTGATAGTCTTG 97463 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCATTAT 101241 || || | |||||| | ||| ||||||||||| Sbjct 97462 CCAGTGAGTGTTTTCACAAAGATTTGCATTAT 97431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409606858426236