Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq9558 84.2 2e-11 >seq9558 Length=35122 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785 || |||| ||||| || || | | ||||||||||||||| ||||| || || || Sbjct 419 TGGGCCAGCATGTGGGTCAGCAATGCGTAGCTGGCGATGTTGAAGGGAACGCCCAGGAAG 360 Query 29786 ATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGA 29845 |||||| | | |||||| |||||||| ||||| |||||| ||| || ||||| Sbjct 359 ATGTCCGCGCTGCGCTGGTACAGCTGGCAACTGAGCTTGCCGTCGGCCACATAGAACTGG 300 Query 29846 CACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACAC 29905 | | ||| ||||| || || ||||| | || ||| ||||||||| | Sbjct 299 AAGAAGGCGTGGCAGGGCATGAGCGCCATCTGCGGCAGGTCGGCCACGTTCCAGGCGCTG 240 Query 29906 ACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA 29939 ||||||||||| | | || |||||| || ||| Sbjct 239 ACGATGATGCGGCGGCTGTCCGGGTTGCTCTTGA 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406109718968344