Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq9826 214 6e-51 >seq9826 Length=41569 Score = 214 bits (236), Expect = 6e-51 Identities = 208/268 (78%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 33921 GCCCGGAGCGAGCTGCTCGAATCGCGAGTACTTACCCAGGAACGCGCACCGGACAGTGCT 33980 |||||| ||||| | ||| || |||||| |||| || || ||||| ||| | || | Sbjct 506 GCCCGGTGCGAGGTTCTCAAAGCGCGAGAACTTGCCGAGAAACGCCAGCCGTGCCGTACC 447 Query 33981 TGGCTCGCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTC 34040 || |||||| || ||||| |||| || | || |||||||| ||||| ||| || Sbjct 446 CAGCGGGCCGTTACGCTGCTTGCCGATAATGATTTCGGCCACGCCCTTGTACTCGGTCTC 387 Query 34041 CGGGTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGC 34100 |||||||| |||||||| ||||| ||||||||||| | |||||||||||||||||| || Sbjct 386 GGGGTGATACACCTCGTCGCGGTAAACGAACATGATGATGTCGGCGTCCTGCTCGATTGC 327 Query 34101 CCCGGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCG 34160 |||||| ||||||| ||| || | ||||| || ||||| || |||||||||||| || Sbjct 326 CCCGGATTCGCGCAAGTCGGAGTTGATCGGGCGTTTGTTAGGGCGCTGCTCCAGGCCACG 267 Query 34161 GTTGAGCTGCGACAGCACGATCACGGGG 34188 ||| ||||||||||| | ||||| ||| Sbjct 266 GTTAAGCTGCGACAGGGCAATCACCGGG 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160443412869960