Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq8589 255 8e-63 seq10803 138 2e-27 seq10743 109 8e-19 >seq8589 Length=14632 Score = 255 bits (282), Expect = 8e-63 Identities = 411/585 (70%), Gaps = 12/585 (2%) Strand=Plus/Plus Query 46632 TGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCC 46691 ||||||||||||||| | |||||||| | | |||||| |||||||||||||| | || Sbjct 5797 TGCAAAATCACAATGCACTCCTTCATCACGAGAAATTAACTCGTTAGAAAATGTTAAACC 5856 Query 46692 AGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATAT 46751 |||||||| || | || || | |||||| |||| || | ||| || |||||||| Sbjct 5857 AGGCATTAACCCTCTTTTCTTTAACCAAAAAATAGAACAAAACGCTCCTGAGAAGAATAT 5916 Query 46752 GCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAATCCA 46811 ||||| ||||| || ||||||| |||||| || | || | |||| | |||||| Sbjct 5917 TCCTTCCACAGCTGCAAATGCGATAAGTCTTTCAGCAAAA---GAATCAGACTCAATCCA 5973 Query 46812 CCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871 || ||||| || || ||| | |||| || | ||| ||||||| || | Sbjct 5974 TTTTAATGCCCATTCTGCTTTTCTTTTTATTGCTGGAAACACTTCAATAGCATGGAATAA 6033 Query 46872 AAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGA 46931 | ||| || | |||||| ||||| ||||| || |||||| ||| |||| Sbjct 6034 TTTATCTTTCTCTACCTCATCTTTCACATAAGTATCAATCAAAAGAGAATAGGTTTCGCT 6093 Query 46932 ATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTAC 46991 |||||| || || || || |||||||| || ||| || | ||||| | | || || Sbjct 6094 ATGAATATTCTCCATCATAATTTGAAATCCATAGAAAAATTTAGCTTCGGCATATTGCAC 6153 Query 46992 CTC-TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAA 47050 || | ||||||| ||| | ||||| |||||||| || || ||| |||||||||| Sbjct 6154 TTCATTAACAAAAT-TTTCTGCTAAATTTTCATTCACAATCCCGTCAGATGCAGCAAAAA 6212 Query 47051 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTT---TATTCCAGTCAT 47107 | || || | ||| |||||||||||||||||||| | | | || | |||||||| Sbjct 6213 AAGCTAAAATATGCTTAATAAAATATTTTTCATCTTCATTTAATTTCGTGTTCCAGTCTG 6272 Query 47108 TGATATCTTTTGAT--ATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTT 47165 ||||||| ||||| | ||||| ||||||||| ||||| || ||||| |||||| Sbjct 6273 TGATATC--TTGATGCAAATCTATTTCTTCAGCAGTCCAAAAACTTGCCTCCATTTTTTT 6330 Query 47166 ATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 ||| | ||| |||||| ||| | || |||||||| ||||| Sbjct 6331 GTACCATTCCCAAATATCATGATGCTTAATTGGAAAAATGACAAA 6375 >seq10803 Length=2816097 Score = 138 bits (152), Expect = 2e-27 Identities = 220/312 (71%), Gaps = 3/312 (1%) Strand=Plus/Plus Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936 || |||||||| || ||||||| || || ||||| | | || ||||||| || Sbjct 2064211 CCAATTCCTCCAGCATTTTTAGAAATAAGTGCACAAGTCCTTAGAGTTCCATAGATTCCT 2064270 Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996 || ||||||||||| ||| |||||||||| || || |||||||| | | || Sbjct 2064271 TCAATACTATCATCAGACATTGTAAGAAGAAAGCAACTGGACATTTGTGGTCGGTTTGTG 2064330 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056 ||||| ||||||| || || |||||||| |||||||| |||||||| | || ||||| Sbjct 2064331 CCTGCGTTAAACAGGGTTGGTGATGCATGGGTGAACCACTTTTCAGACATCAGGTTGTAA 2064390 Query 77057 GTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAACAT 77115 || |||||| | || || || || || | || ||||| ||| || ||||| | ||| Sbjct 2064391 GTCTCAATAGCAGCATCAATGTCTTCACCG-TGGATTCCCACACTCACTCGCATTAGCAT 2064449 Query 77116 ATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 77175 ||||| |||| ||| | ||| ||| || || | | ||||||| | ||| || Sbjct 2064450 GTGCTGTGGTCTCTCTGCTACCTTGCCATTGATCTTTAGTAGGTATGATCTCATCAAGGT 2064509 Query 77176 -TTTAAAACCAA 77186 || |||||||| Sbjct 2064510 CTTAAAAACCAA 2064521 Score = 122 bits (134), Expect = 1e-22 Identities = 190/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 ||||| || |||| ||||||| |||| || || || | || |||||| |||| Sbjct 2060720 TTCTTCATGCCATCGTTCCACAGACCCATCTCTGTCAAGTCTTTGAGAAGATGATGATTG 2060779 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 ||||| || || ||||| |||| || | || || ||| |||||||| || ||||| || Sbjct 2060780 ACAATCTGGAACTCTCCTGACAGCACGCGTCTAGAGTAGATATTACTAGTGTATGGCTCA 2060839 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835 | |||||| || || || | || |||||||| || || || ||||| || || | || | Sbjct 2060840 ATAGATTCGTTATTGCCAAGTATCTGAGCAGTGGACGCCGTGGGCATGGGCGCAATCAGT 2060899 Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895 | ||| || | ||| |||||| ||| || | || || | ||| ||||| || Sbjct 2060900 AGACTGTTGCGGAGGCCATGTTCCTTGACCTTCTTCTTCAGCGCCTCCCAGTCCCACAGG 2060959 Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTG 75927 | ||| || |||| |||||||||||| || Sbjct 2060960 TTTGAGGGAGTGACATTCCAGAGATCGTACTG 2060991 >seq10743 Length=1036592 Score = 109 bits (120), Expect = 8e-19 Identities = 171/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 |||||||||||||| || || |||||| | |||||| |||| ||||| || || || Sbjct 90883 AGTCTATCTGCAACAAACTCAATATACTGTCTCATCAAGGCACAGTTCATGCCAATCAGC 90824 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 ||||| || ||||| || || ||||| || ||||| ||||||||| || || Sbjct 90823 TTGACTGGAAGAGCAGATGTGAGGAACTCCTGCTCAATGACAACAGCATCCTTGATGATT 90764 Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638 | | || || |||||| || || | | | || |||| || || ||||| Sbjct 90763 CCTCTAACAGTCTCCTCATCAGGCTTATTAACTAGGTACTTGTACATCAAGCAGGCAAAG 90704 Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698 || ||||| || ||||||||||| || || | || || || ||||| || || ||||| Sbjct 90703 TCGCAATGGAGACCTTCATCTCTGCTGATAAGCTCATTCGAGAATGTCAGACCTGGCATA 90644 Query 46699 AGTCC 46703 ||||| Sbjct 90643 AGTCC 90639 Score = 109 bits (120), Expect = 8e-19 Identities = 171/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 |||||||||||||| || || |||||| | |||||| |||| ||||| || || || Sbjct 107196 AGTCTATCTGCAACAAACTCAATATACTGTCTCATCAAGGCACAGTTCATGCCAATCAGC 107255 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 ||||| || ||||| || || ||||| || ||||| ||||||||| || || Sbjct 107256 TTGACGGGAAGAGCAGATGTGAGGAACTCCTGCTCAATGACAACAGCATCCTTGATGATT 107315 Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638 | | || || |||||| || || | | | || |||| || || ||||| Sbjct 107316 CCTCTAACAGTCTCCTCATCAGGCTTATTAACTAGGTACTTGTACATCAAGCAGGCAAAG 107375 Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698 || ||||| || ||||||||||| || || | || || || ||||| || || ||||| Sbjct 107376 TCGCAATGGAGACCTTCATCTCTGCTGATAAGCTCATTCGAGAATGTCAGACCTGGCATA 107435 Query 46699 AGTCC 46703 ||||| Sbjct 107436 AGTCC 107440 Score = 100 bits (110), Expect = 4e-16 Identities = 169/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 |||||||||||||| || || |||||| | |||| | |||| ||||| || || || Sbjct 61143 AGTCTATCTGCAACAAACTCAATATACTGTCTCATTAAGGCACAGTTCATGCCAATCAGC 61202 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 ||||| || ||||| || || ||||| || ||||| ||||||||| || || Sbjct 61203 TTGACGGGAAGAGCAGATGTGAGGAACTCCTGCTCAATGACAACAGCATCCTTGATGATT 61262 Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638 | | || || |||||| || || | | | || |||| || || || || Sbjct 61263 CCTCTAACAGTCTCCTCATCAGGCTTATTAACTAGGTACTTGTACATCAAGCAGGCGAAG 61322 Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698 || ||||| || ||||||||||| || || | || || || ||||| || || ||||| Sbjct 61323 TCGCAATGGAGACCTTCATCTCTGCTGATAAGCTCATTTGAGAATGTCAGACCTGGCATA 61382 Query 46699 AGTCC 46703 ||||| Sbjct 61383 AGTCC 61387 Score = 95.1 bits (104), Expect = 2e-14 Identities = 167/240 (70%), Gaps = 9/240 (4%) Strand=Plus/Plus Query 46707 CTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGC 46766 ||| || ||||| || || || || || || ||||||||||| ||||| ||||| || || Sbjct 107837 CTTCTTCAGCCAGAAAATGGCAGCAAAGGACCCAGAAAAGAAGATGCCCTCTACGGCAGC 107896 Query 46767 GAATGCGACAAGTCTCTCTCCGTAACTG--GCATCATT----ATGAATCCACCTTTGAGC 46820 || |||| || ||||| || || || || || | || ||||| | |||| Sbjct 107897 AAAGGCGATAATCCTCTCGCC--AAATGATGC-TCTCTGGGGATTGATCCAGTTCAGAGC 107953 Query 46821 CCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGttttt 46880 ||| | ||||| ||| | |||||||||||||| || |||||||| || ||| | ||| Sbjct 107954 CCAGTGCGCCTTCTTCATGACACAAGGCATTGTCTCAATAGCATTGAACAGATTGACTTT 108013 Query 46881 ttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTT 46940 ||| | | ||||| | | || || | ||| || ||||| || || || ||||| Sbjct 108014 TTCTGCCTTGTCTTTGATCAGGCTCTCGATCAGAAGGCTGTACATCTCAGAGTGGATGTT 108073 Score = 93.3 bits (102), Expect = 6e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 46942 TCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAA 47001 |||||||| ||||| || ||||| || || || || |||| ||||||||| ||| ||| Sbjct 63488 TCAATAGCAATCTGGAAGCCGTAGAAGCACCTGGCCTCAGGAATCTGTACTTCTTGACAG 63547 Query 47002 AATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATAC 47060 || | || |||| ||| ||||| || || ||||| || || ||||| ||||||||||| Sbjct 63548 AAGCACTCT-ACAAGATTTTCATTGACGATGCCATCGCTGGCCGCAAAGAATGCCAATAC 63606 Query 47061 ATG 47063 ||| Sbjct 63607 ATG 63609 Score = 93.3 bits (102), Expect = 6e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 46942 TCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAA 47001 |||||||| ||||| || ||||| || || || || |||| ||||||||| ||| ||| Sbjct 76525 TCAATAGCAATCTGGAAGCCGTAGAAGCACCTGGCCTCAGGAATCTGTACTTCTTGACAG 76466 Query 47002 AATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATAC 47060 || | || |||| ||| ||||| || || ||||| || || ||||| ||||||||||| Sbjct 76465 AAGCACTCT-ACAAGATTTTCATTGACGATGCCATCGCTGGCCGCAAAGAATGCCAATAC 76407 Query 47061 ATG 47063 ||| Sbjct 76406 ATG 76404 Score = 93.3 bits (102), Expect = 6e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 46942 TCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAA 47001 |||||||| ||||| || ||||| || ||||| || |||| ||||||||| ||| || Sbjct 81418 TCAATAGCAATCTGGAAGCCGTAGAAGCATCTGGCCTCAGGAATCTGTACTTCTTGACTG 81359 Query 47002 AATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATAC 47060 || | || |||| ||| ||||| || || ||||| || || ||||| ||||||||||| Sbjct 81358 AAGCACTCT-ACAAGATTTTCATTGACGATGCCATCGCTGGCCGCAAAGAATGCCAATAC 81300 Query 47061 ATG 47063 ||| Sbjct 81299 ATG 81297 Score = 93.3 bits (102), Expect = 6e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 46942 TCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAA 47001 |||||||| ||||| || ||||| || || || || |||| ||||||||| ||| ||| Sbjct 89773 TCAATAGCAATCTGGAAGCCGTAGAAGCACCTGGCCTCAGGAATCTGTACTTCTTGACAG 89714 Query 47002 AATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATAC 47060 || | || |||| ||| ||||| || || ||||| || || ||||| ||||||||||| Sbjct 89713 AAGCACTCT-ACAAGATTTTCATTGACGATGCCATCGCTGGCCGCAAAGAATGCCAATAC 89655 Query 47061 ATG 47063 ||| Sbjct 89654 ATG 89652 Score = 89.7 bits (98), Expect = 7e-13 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 46942 TCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAA 47001 |||||||| ||||| || ||||| || || || || |||| ||||||||| ||| || Sbjct 108302 TCAATAGCAATCTGGAAGCCGTAGAAGCACCTGGCCTCAGGAATCTGTACTTCTTGACTG 108361 Query 47002 AATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATAC 47060 || | || |||| ||| ||||| || || ||||| || || ||||| ||||||||||| Sbjct 108362 AAGCACTCT-ACAAGATTTTCATTGACGATGCCATCGCTGGCCGCAAAGAATGCCAATAC 108420 Query 47061 ATG 47063 ||| Sbjct 108421 ATG 108423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712838118209280