Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq2361 86.0 2e-12 >seq2361 Length=2839 Score = 86.0 bits (94), Expect = 2e-12 Identities = 126/175 (72%), Gaps = 5/175 (3%) Strand=Plus/Plus Query 26908 GCCATTCATGCCCACGTTGATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCA 26967 ||| | |||| | ||| ||||||| ||||||||||||| |||||| | | || ||| Sbjct 1984 GCCCTGCATGTCGACGATGATTTCGGTGGTGTAGCGCTTAACGCCGTCTTTTTC---CCA 2040 Query 26968 TTTACGGGTTCGCAGACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACC 27027 | ||||| |||| ||| || || | |||| |||||||||||||| || || Sbjct 2041 CTCGCGGGTCTGCAGCTTGCCCTCGATATATACCTGCGAACCTTTGCGCAGGTACTCGCC 2100 Query 27028 AGCGATTTCCGCCAGCTTGCCGAAGA-TGACAACGCGGTGCCATTCCGTCTGCTC 27081 ||| || || || | ||||||||| | ||| || |||||||| || || | ||| Sbjct 2101 AGCAATCTCGGCAACCTTGCCGAACAGCGAC-ACACGGTGCCACTCGGTTTTCTC 2154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133998806082240