Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq9558 251 4e-62 >seq9558 Length=35122 Score = 251 bits (278), Expect = 4e-62 Identities = 452/645 (70%), Gaps = 39/645 (6%) Strand=Plus/Plus Query 950 GAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTC 1009 ||||| ||||||||||| | ||||||| |||||| ||| | || |||| | Sbjct 22 GAACTGCTGTGGTTCCTGCGCGGCGACAGCAACGTGCGCTGGCTGCAGGAGCGCGGCTGC 81 Query 1010 ACCATCTGGGACGAGTGGGC---CGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCG 1066 ||||||||| |||| ||||| ||| | ||||| |||| || || |||||||||| | Sbjct 82 ACCATCTGGAACGAATGGGCACGCGAGGACGGCG---ACCTGGGCCCGGTCTACGGCGTG 138 Query 1067 CAGTGGCGGCACTGGC--ATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGG 1124 || ||||| |||||| | | || ||||| || | | || ||||||||| | Sbjct 139 CAATGGCGCAACTGGCCCACGCCG--GACGGCGG--CCAC----ATCGACCAGATC---G 187 Query 1125 CCGCCGTGG---AGCTGCTTCGCGAGGA-CCCTGACTCGCGCCGGAACGTGGTATCCGCA 1180 ||| |||| ||| ||| | ||| | ||| ||| ||||| | | | || ||| Sbjct 188 CCGAAGTGGTCAAGCAGCT-CAAGAGCAACCCGGACAGCCGCCGCATCATCGTCAGCGCC 246 Query 1181 TGGAACGTCGGTGACCT-CAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCT 1239 |||||||| | ||||| | || | ||||| || || |||||| | | |||||| | Sbjct 247 TGGAACGTGGCCGACCTGCCGC-AGATGGCGCTCATGCCCTGCCACGCCTTCTTCCAGTT 305 Query 1240 GTACGTCGTCGACGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCC 1298 || || | ||||||| |||| | ||| || | |||||||||||||||||||| |||| Sbjct 306 CTATGTGGCCGACGGCAAGCTCA-GTTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCC 364 Query 1299 TCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGG 1358 | || || || ||||| |||||| ||||| | || | |||||| | || ||||| Sbjct 365 TGGGCGTTCCCTTCAACATCGCCAGCTACGCATTGCTGACCCACATGCTGGCCCAGCAAT 424 Query 1359 CCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACC 1418 || ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 425 GCGACCTGCAGGTGGGTGACTTCGTCTGGACCGGCGGCGACTGCCACATCTACAACAACC 484 Query 1419 ACGTCGACCAGGCGCTGATGCAGCTCCGCCGACGACCGCGGCCCTACCCGAGGCTCGTGC 1478 | ||| ||||| || ||||| || | || ||||||||| || ||| Sbjct 485 ATTTCGCCCAGGTCGAGACCCAGCTGGCGCGCCAGCCCTTCGCCTACCCGACGC---TGC 541 Query 1479 TACACCACGCGCCG-------TCGATCTTCGACTACCGGTACGAGCACATCCACCTCGTG 1531 | | || |||||| || ||||||| |||| ||||||| || || | |||| Sbjct 542 -AGATCAAGCGCCGGCCCGACTCCATCTTCGGCTACGAGTACGAGGACTTCGAGGTCGTC 600 Query 1532 AACTACGACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGA 1576 |||| | | ||| | | |||||||| || |||||||||||| Sbjct 601 GGCTACCAGCACCACGAGCCCATCAAGGCCCCCGTGGCCGTCTGA 645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296092207294404