Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq9558 102 1e-16 >seq9558 Length=35122 Score = 102 bits (112), Expect = 1e-16 Identities = 215/318 (68%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 196755 TGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACATCGCTTCG 196814 || ||||| ||||||||||| || ||| ||||||| || || || ||||||||||| Sbjct 331 TGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTTCCCTTCAACATCGCCAGC 390 Query 196815 TACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGATTTCGTC 196874 ||||| || || |||||| |||| ||||| | | || || |||||| |||||| Sbjct 391 TACGCATTGCTGACCCACATGCTGGCCCAGCAATGCGACCTGCAGGTGGGTGACTTCGTC 450 Query 196875 TGGACGGGCGGCGATACCCATCTGTACTCTAACCATCTGGAACAGGCCACGTTGCAGCTC 196934 ||||| |||||||| ||| | ||| |||||| | | |||| | | ||||| Sbjct 451 TGGACCGGCGGCGACTGCCACATCTACAACAACCATTTCGCCCAGGTCGAGACCCAGCTG 510 Query 196935 TCCCGTGTACCGCATGATCT-GCCTAAGCTCGTTATCAAACGTAAACCGGATTCCATTTT 196993 | || | | | | || || | ||| ||||| || || || ||||| || Sbjct 511 GCGCG-CCAGCCCTTCGCCTACCCGACGCTGCAGATCAAGCGCCGGCCCGACTCCATCTT 569 Query 196994 CGACTATAAGTTCGAAGATTTTGAAATCGTGGGTTACGAAAGCCACCCACCCATTAAGGC 197053 || ||| ||| ||| || || || |||| || ||| | |||| ||||| ||||| Sbjct 570 CGGCTACGAGTACGAGGACTTCGAGGTCGTCGGCTACCAGCACCACGAGCCCATCAAGGC 629 Query 197054 ACCGGTTGCCATCTAAGG 197071 || || ||| ||| ||| Sbjct 630 CCCCGTGGCCGTCTGAGG 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770203170012640